nLs.2.1.2.g07200 (Litomosoides sigmodontis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nLs.2.1.2.g07200 T336711_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t07200-RA Sox 45 111

Links

Other Sox family TFs
Other Litomosoides sigmodontis TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g05839 Acanthocheilonema viteae nAv.1.0.1.g05839 N 0.741
ASIM_0001613301 Anisakis simplex ASIM_0001613301 N 0.467
ACUA025632 Anopheles culicifacies ACUA025632 N 0.419
ADAC005840 Anopheles darlingi ADAC005840 N 0.419
AEPI009418 Anopheles epiroticus AEPI009418 N 0.419
AFAF001135 Anopheles farauti AFAF001135 N 0.419
AMIN002364 Anopheles minimus AMIN002364 N 0.419
ASTEI10740 Anopheles stephensi ASTEI10740 N 0.419
ASU_00939 Ascaris suum ASU_00939 N 0.497
BGLB013626 Biomphalaria glabrata BGLB013626 N 0.428
fgenesh2_pg.scaffold_1690000001 Branchiostoma floridae fgenesh2_pg.scaffold_1690000001 N 0.424
Bm9369 Brugia malayi Bm9369 N 0.741
Bm7765 Brugia malayi Bm7765 N 0.741
Bm2393 Brugia malayi Bm2393 N 0.493
BTMF_0001523401 Brugia timori BTMF_0001523401 N 0.741
BTMF_0001478401 Brugia timori BTMF_0001478401 N 0.419
BXY_0575000 Bursaphelenchus xylophilus BXY_0575000 N 0.443
CBN31697 Caenorhabditis brenneri CBN31697 N 0.442
CBN15844 Caenorhabditis brenneri CBN15844 N 0.453
CBN07735 Caenorhabditis brenneri CBN07735 N 0.442
CBG11867 Caenorhabditis briggsae CBG11867 N 0.442
pbrm-1 Caenorhabditis elegans WBGene00007042 N 0.443
CJA30740 Caenorhabditis japonica CJA30740 N 0.430
CJA03316 Caenorhabditis japonica CJA03316 N 0.430
CRE28315 Caenorhabditis remanei CRE28315 N 0.423
CRE14258 Caenorhabditis remanei CRE14258 N 0.442
ENSCING00000003572 Ciona intestinalis ENSCING00000003572 N 0.430
ENSCSAVG00000009396 Ciona savignyi ENSCSAVG00000009396 N 0.418
CpipJ_CPIJ016883 Culex pipiens CpipJ_CPIJ016883 N 0.423
CPIJ016883 Culex quinquefasciatus CPIJ016883 N 0.423
nDi.2.2.2.g01867 Dirofilaria immitis nDi.2.2.2.g01867 N 0.714
nDi.2.2.2.g06671 Dirofilaria immitis nDi.2.2.2.g06671 N 0.493
nDi.2.2.2.g10298 Dirofilaria immitis nDi.2.2.2.g10298 N 0.493
EEL_0000724001 Elaeophora elaphi EEL_0000724001 N 0.741
GPUH_0001659301 Gongylonema pulchrum GPUH_0001659301 N 0.456
GPUH_0001196001 Gongylonema pulchrum GPUH_0001196001 N 0.509
GPUH_0000691201 Gongylonema pulchrum GPUH_0000691201 N 0.509
ISCW005293 Ixodes scapularis ISCW005293 N 0.502
nLs.2.1.2.g08566 Litomosoides sigmodontis nLs.2.1.2.g08566 N 0.493
LOAG_15875 Loa loa LOAG_15875 N 0.456
LOAG_11340 Loa loa LOAG_11340 N 0.741
MhA1_Contig1224.frz3.gene1 Meloidogyne hapla MhA1_Contig1224.frz3.gene1 N 0.425
NEMVEDRAFT_v1g127783 Nematostella vectensis NEMVEDRAFT_v1g127783 N 0.416
OFLC_0000194401 Onchocerca flexuosa OFLC_0000194401 N 0.741
nOo.2.0.1.g07918 Onchocerca ochengi nOo.2.0.1.g07918 N 0.493
nOo.2.0.1.g03638 Onchocerca ochengi nOo.2.0.1.g03638 N 0.741
WBGene00238178 Onchocerca volvulus WBGene00238178 N 0.493
WBGene00239172 Onchocerca volvulus WBGene00239172 N 0.741
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.433
PHUM244090 Pediculus humanus PHUM244090 N 0.422
RSKR_0000607700 Rhabditophanes kr3021 RSKR_0000607700 N 0.421
RPRC014309 Rhodnius prolixus RPRC014309 N 0.420
Sakowv30031460m.g Saccoglossus kowalevskii Sakowv30031460m.g N 0.426
L889_g13125 Steinernema feltiae L889_g13125 N 0.418
SMAR009325 Strigamia maritima SMAR009325 N 0.491
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.433
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.440
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.433
SMUV_0000135001 Syphacia muris SMUV_0000135001 N 0.504
tetur21g01330 Tetranychus urticae tetur21g01330 N 0.519
TCLT_0000189901 Thelazia callipaeda TCLT_0000189901 N 0.493
TC000618 Tribolium castaneum TC000618 N 0.428
D917_05048 Trichinella nativa D917_05048 N 0.436
D917_05046 Trichinella nativa D917_05046 N 0.443
EFV56090 Trichinella spiralis EFV56090 N 0.443
EFV56095 Trichinella spiralis EFV56095 N 0.436
TMUE_s0227000300 Trichuris muris TMUE_s0227000300 N 0.430
TMUE_s0089001400 Trichuris muris TMUE_s0089001400 N 0.440
D918_06015 Trichuris suis D918_06015 N 0.436
D918_05288 Trichuris suis D918_05288 N 0.440
WUBG_03167 Wuchereria bancrofti WUBG_03167 N 0.741
WUBG_00348 Wuchereria bancrofti WUBG_00348 N 0.493