CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAVG00000009396
(
Ciona savignyi
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSCSAVG00000009396
T327827_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAVP00000015954
Sox
1243
1304
STGYILFASHCHPKVRADNPDLPFGDISKLVGEEWRNLDEEEKHEYEEKAREKMAIAEAEGR
ENSCSAVP00000015955
Sox
1232
1293
STGYILFASHCHPKVRADNPDLPFGDISKLVGEEWRNLDEEEKHEYEEKAREKMAIAEAEGR
Links
Other
Sox
family TFs
Other
Ciona savignyi
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCING00000003572
Ciona intestinalis
ENSCING00000003572
N
0.702
SNAPOd2T00014396001
Oikopleura dioica
SNAPOd2T00014396001
N
0.460
TCLT_0000189901
Thelazia callipaeda
TCLT_0000189901
N
0.439
WUBG_00348
Wuchereria bancrofti
WUBG_00348
N
0.435
Bm2393
Brugia malayi
Bm2393
N
0.435
WBGene00238178
Onchocerca volvulus
WBGene00238178
N
0.435
nDi.2.2.2.g06671
Dirofilaria immitis
nDi.2.2.2.g06671
N
0.435
nDi.2.2.2.g10298
Dirofilaria immitis
nDi.2.2.2.g10298
N
0.435
nLs.2.1.2.g08566
Litomosoides sigmodontis
nLs.2.1.2.g08566
N
0.435
nOo.2.0.1.g07918
Onchocerca ochengi
nOo.2.0.1.g07918
N
0.435
SMAR009325
Strigamia maritima
SMAR009325
N
0.433
SSTP_0001127200
Strongyloides stercoralis
SSTP_0001127200
N
0.431
PTRK_0001310900
Parastrongyloides trichosuri
PTRK_0001310900
N
0.428
SPAL_0001274100
Strongyloides papillosus
SPAL_0001274100
N
0.428
SSTP_0000878000
Strongyloides stercoralis
SSTP_0000878000
N
0.428
SVE_0827400
Strongyloides venezuelensis
SVE_0827400
N
0.428
ASU_00939
Ascaris suum
ASU_00939
N
0.424
SMUV_0000135001
Syphacia muris
SMUV_0000135001
N
0.424
D918_05288
Trichuris suis
D918_05288
N
0.421
TMUE_s0089001400
Trichuris muris
TMUE_s0089001400
N
0.421
GPLIN_000839700
Globodera pallida
GPLIN_000839700
N
0.419
WUBG_03167
Wuchereria bancrofti
WUBG_03167
N
0.418
Bm7765
Brugia malayi
Bm7765
N
0.418
Bm9369
Brugia malayi
Bm9369
N
0.418
ISCW005293
Ixodes scapularis
ISCW005293
N
0.418
LOAG_11340
Loa loa
LOAG_11340
N
0.418
WBGene00239172
Onchocerca volvulus
WBGene00239172
N
0.418
TVAG_346400
Trichomonas vaginalis
TVAG_346400
N
0.418
BTMF_0001523401
Brugia timori
BTMF_0001523401
N
0.418
EEL_0000724001
Elaeophora elaphi
EEL_0000724001
N
0.418
nAv.1.0.1.g05839
Acanthocheilonema viteae
nAv.1.0.1.g05839
N
0.418
nDi.2.2.2.g01867
Dirofilaria immitis
nDi.2.2.2.g01867
N
0.418
nLs.2.1.2.g07200
Litomosoides sigmodontis
nLs.2.1.2.g07200
N
0.418
nOo.2.0.1.g03638
Onchocerca ochengi
nOo.2.0.1.g03638
N
0.418
OFLC_0000194401
Onchocerca flexuosa
OFLC_0000194401
N
0.418