CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr04374
(
Ophisaurus gracilis
)
STAT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02864 (STAT_bind)
IPR013801
Ogr04374
T337847_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Stat6
M08173_2.00
Mus musculus
NNBTTCYWVRGAANN
NNTTCYBWRGAAVNN
ChIP-seq
Mathelier et al.(2014)
MA0520.1
0.706
0.706
Stat6
M09418_2.00
Mus musculus
BDBTTCHBDRGAAV
BTTCYHVDGAAVHV
Misc
Kulakovskiy et al.(2013)
STAT6_MOUSE.H11MO.0.A
0.706
0.706
Stat6
M09644_2.00
Mus musculus
TTCCNNAGAA
TTCTNNGGAA
Misc
Heinz et al.(2010)
Macrophage-Stat6_GSE38377
0.706
0.706
Stat6
M09643_2.00
Mus musculus
NNTTCYNNRGAA
TTCYNNRGAANN
Misc
Heinz et al.(2010)
CD4-Stat6_GSE22104
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr04374
STAT
273
526
LLVDKQPPQVLKTQTKFQATVRFLLGPQLLKPPHTSFTVVADIVTEKQAREIAASHPGAVFNESTGEIVNNTAPLETNTTSNACCALFKNMLLKKIKRCDRKSTESVTEEKCAILFSANVSLGPNKTNFHLQAVSLPIVVIVHGNQDNNAKATILWDNAFAEPTRIPFMVAERVSWDKMCETLNQKFMAEVQTTKGLLDQHYFFLAQKIFDDNATTPEEFQKRPVSWSQFNKEMLPGRGFTFWQWFEGVLDLTK
Links
Other
STAT
family TFs
Other
Ophisaurus gracilis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSBTAP00000003762-D1
Bos grunniens
ENSBTAP00000003762-D1
I
ATOH1
Bos taurus
ENSBTAG00000002895
I
ATOH1
Callithrix jacchus
ENSCJAG00000022028
I
ATOH1
Canis familiaris
ENSCAFG00000010016
I
ENSCSAG00000000408
Chlorocebus sabaeus
ENSCSAG00000000408
I
ATOH1
Choloepus hoffmanni
ENSCHOG00000000748
I
atoh1a
Danio rerio
ENSDARG00000055294
I
ATOH1
Dasypus novemcinctus
ENSDNOG00000018799
I
ATOH1
Echinops telfairi
ENSETEG00000019807
I
ATOH1
Equus caballus
ENSECAG00000001213
I
ENSGMOG00000019019
Gadus morhua
ENSGMOG00000019019
I
atoh1a
Gasterosteus aculeatus
ENSGACG00000007342
N
ATOH1
Gorilla gorilla
ENSGGOG00000001096
I
ATOH1
Homo sapiens
ENSG00000172238
D
ENSSTOG00000009183
Ictidomys tridecemlineatus
ENSSTOG00000009183
I
ENSLACG00000005491
Latimeria chalumnae
ENSLACG00000005491
I
ENSLOCG00000017552
Lepisosteus oculatus
ENSLOCG00000017552
I
ENSLAFG00000023246
Loxodonta africana
ENSLAFG00000023246
I
ENSP00000302216
Macaca fascicularis
ENSP00000302216
I
ATOH1
Macaca mulatta
ENSMMUG00000002367
I
ENSMEUG00000009664
Macropus eugenii
ENSMEUG00000009664
I
ATOH1
Monodelphis domestica
ENSMODG00000019270
I
ENSMPUG00000019092
Mustela putorius furo
ENSMPUG00000019092
I
Atoh1
Mus musculus
ENSMUSG00000073043
D
Myotis_brandtii_ATOH1_10005345
Myotis brandtii
Myotis_brandtii_ATOH1_10005345
I
ATOH1
Myotis lucifugus
ENSMLUG00000008044
I
ENSNLEG00000018621
Nomascus leucogenys
ENSNLEG00000018621
I
ATOH1
Ochotona princeps
ENSOPRG00000008973
I
ATOH1
Oryctolagus cuniculus
ENSOCUG00000013154
I
atoh1a
Oryzias latipes
ENSORLG00000004876
I
ATOH1
Otolemur garnettii
ENSOGAG00000030783
I
ATOH1
Pan troglodytes
ENSPTRG00000031141
I
ENSPANG00000000252
Papio anubis
ENSPANG00000000252
I
ENSPFOG00000019101
Poecilia formosa
ENSPFOG00000019101
I
ENSPPYG00000015283
Pongo abelii
ENSPPYG00000015283
I
Atoh1
Rattus norvegicus
ENSRNOG00000006383
I
ENSSHAG00000009094
Sarcophilus harrisii
ENSSHAG00000009094
I
ATOH1
Sus scrofa
ENSSSCG00000009196
I
atoh1a
Takifugu rubripes
ENSTRUG00000012647
I
atoh1a
Tetraodon nigroviridis
ENSTNIG00000017584
I
ATOH1
Tupaia belangeri
ENSTBEG00000003291
I
XP_002937284
Xenopus tropicalis
XP_002937284
I
ENSXMAG00000015349
Xiphophorus maculatus
ENSXMAG00000015349
I