CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMPUG00000000551
(
Mustela putorius furo
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSMPUG00000000551
T340122_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbr1
M01028_2.00
Mus musculus
DTVRCAMNYH
DRNKTGYBAH
PBM
SebePedros et al.(2013)
pTH2659
0.920
1.000
TBR1
M03560_2.00
Homo sapiens
AGGTGTGAAN
NTTCACACCT
SELEX
Jolma et al.(2013)
TBR1_1
0.920
1.000
TBR1
M03561_2.00
Homo sapiens
RAGGTGTGAAH
DTTCACACCTY
SELEX
Jolma et al.(2013)
TBR1_2
0.920
1.000
Eomes
M00215_2.00
Mus musculus
RDGTGYBANN
NNTVRCACHY
PBM
Badis et al.(2009)
Eomes_0921
0.865
0.874
EOMES
M03563_2.00
Homo sapiens
DAGGTGTGAWNNN
NNNWTCACACCTH
SELEX
Jolma et al.(2013)
EOMES_1
0.865
0.869
EOMES
M03564_2.00
Homo sapiens
TVACACNTNNNDRNGTGTGA
TCACACNYHNNNANGTGTBA
SELEX
Jolma et al.(2013)
EOMES_2
0.865
0.869
EOMES
M02752_2.00
Homo sapiens
AGGTGTGAW
WTCACACCT
SELEX
Jolma et al.(2010)
EOMES_monomer
0.865
0.869
EOMES
M05807_2.00
Homo sapiens
DAGGTGTGAN
NTCACACCTH
SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX
0.865
0.869
EOMES
M09647_2.00
Homo sapiens
ARGTGWKAAN
NTTMWCACYT
Misc
Heinz et al.(2010)
H9-Eomes_GSE26097
0.865
0.869
EOMES
M05808_2.00
Homo sapiens
NABGTGYKAH
DTMRCACVTN
SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX
0.865
0.869
A0A075Q982_PATMI
M00734_2.00
Patiria miniata
NAGGTGTBAN
NTVACACCTN
PBM
Cheatle-Jarvela et al.(2014)
PmTbr
0.789
0.645
TBX21
M03546_2.00
Homo sapiens
GGTGTGAHDTMACACY
RGTGTKAHDTCACACC
SELEX
Jolma et al.(2013)
TBX21_1
0.766
0.732
TBX21
M03547_2.00
Homo sapiens
DAGGTGTGAW
WTCACACCTH
SELEX
Jolma et al.(2013)
TBX21_2
0.766
0.732
TBX21
M03548_2.00
Homo sapiens
TMACACYTNNDAGGTGTGA
TCACACCTHNNARGTGTKA
SELEX
Jolma et al.(2013)
TBX21_3
0.766
0.732
TBX21
M03549_2.00
Homo sapiens
GGTGTGAWATCACACC
GGTGTGATWTCACACC
SELEX
Jolma et al.(2013)
TBX21_4
0.766
0.732
TBX21
M03550_2.00
Homo sapiens
DAGGTGTGAW
WTCACACCTH
SELEX
Jolma et al.(2013)
TBX21_5
0.766
0.732
TBX21
M03551_2.00
Homo sapiens
TSACACCWNMRAGGTGTGA
TCACACCTYKNWGGTGTSA
SELEX
Jolma et al.(2013)
TBX21_6
0.766
0.732
TBX21
M05793_2.00
Homo sapiens
DAGGTGTKAN
NTMACACCTH
SELEX
Yin et al.(2017)
TBX21_eDBD_HT-SELEX
0.766
0.732
TBX21
M09425_2.00
Homo sapiens
NDSDRGSTGWBRN
NYVWCASCYHSHN
Misc
Kulakovskiy et al.(2013)
TBX21_HUMAN.H11MO.0.A
0.766
0.732
Tbx21
M09428_2.00
Mus musculus
DNDDSTGWSDND
HNHSWCASHHNH
Misc
Kulakovskiy et al.(2013)
TBX21_MOUSE.H11MO.0.A
0.766
0.732
Tbx21
M09648_2.00
Mus musculus
ADGTGWSAHN
NDTSWCACHT
Misc
Heinz et al.(2010)
CD8-Tbet_GSE33802
0.766
0.732
TBX21
M05794_2.00
Homo sapiens
DASGTGTKAW
WTMACACSTH
SELEX
Yin et al.(2017)
TBX21_eDBD_Methyl-HT-SELEX
0.766
0.732
SPU_025584
M00733_2.00
Strongylocentrotus purpuratus
RGGTGTGANN
NNTCACACCY
PBM
Cheatle-Jarvela et al.(2014)
SpTbr
0.762
0.617
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMPUP00000000545
T-box
206
393
VYLCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQPRLHVVEVNEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRD
Links
Other
T-box
family TFs
Other
Mustela putorius furo
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART06G06220
Oryza barthii
OBART06G06220
N
OBART06G06230
Oryza barthii
OBART06G06230
N
ORGLA06G0057300
Oryza glaberrima
ORGLA06G0057300
N
ORGLA06G0057400
Oryza glaberrima
ORGLA06G0057400
N
OGLUM06G06540
Oryza glumaepatula
OGLUM06G06540
N
OGLUM06G06550
Oryza glumaepatula
OGLUM06G06550
N
OGLUM06G08330
Oryza glumaepatula
OGLUM06G08330
N
BGIOSGA022472
Oryza indica
BGIOSGA022472
N
OMERI03G32220
Oryza meridionalis
OMERI03G32220
N
OMERI06G09430
Oryza meridionalis
OMERI06G09430
N
ONIVA06G07220
Oryza nivara
ONIVA06G07220
N
ONIVA06G09060
Oryza nivara
ONIVA06G09060
N
OPUNC06G07550
Oryza punctata
OPUNC06G07550
N
ORUFI06G06500
Oryza rufipogon
ORUFI06G06500
N
ORUFI06G08090
Oryza rufipogon
ORUFI06G08090
N