SPU_025584 (Strongylocentrotus purpuratus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 SPU_025584 T340909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPU_025584
M00733_2.00		 Strongylocentrotus purpuratus
RGGTGTGANN
NNTCACACCY		 PBM
Cheatle-Jarvela et al.(2014)
SpTbr		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A0A075Q982_PATMI
M00734_2.00 		Patiria miniata
NAGGTGTBAN
NTVACACCTN		 PBM
Cheatle-Jarvela et al.(2014)
PmTbr 		0.813 0.727
Tbr1
M01028_2.00 		Mus musculus
DTVRCAMNYH
DRNKTGYBAH		 PBM
SebePedros et al.(2013)
pTH2659 		0.762 0.642
TBR1
M03560_2.00 		Homo sapiens
AGGTGTGAAN
NTTCACACCT		 SELEX
Jolma et al.(2013)
TBR1_1 		0.762 0.642
TBR1
M03561_2.00 		Homo sapiens
RAGGTGTGAAH
DTTCACACCTY		 SELEX
Jolma et al.(2013)
TBR1_2 		0.762 0.642
For this family, TFs with SR scores > 0.734 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00733_2.00 T-box 9 185

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_025584-tr T-box 370 546

Links

Other T-box family TFs
Other Strongylocentrotus purpuratus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A0A075Q982_PATMI Patiria miniata A0A075Q982_PATMI D 0.813
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I 0.806
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I 0.803
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I 0.803
LotgiG129911 Lottia gigantea LotgiG129911 I 0.800
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I 0.762
TBR1 Otolemur garnettii ENSOGAG00000004936 I 0.762
ENSP00000374205 Macaca fascicularis ENSP00000374205 I 0.762
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I 0.762
Pvit_15940 Pogona vitticeps Pvit_15940 I 0.762
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I 0.762
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.762
TBR1 Ochotona princeps ENSOPRG00000005150 I 0.762
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I 0.762
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I 0.762
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I 0.762
TBR1 Tupaia belangeri ENSTBEG00000014183 I 0.762
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.762
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I 0.762
TBR1 Pan troglodytes ENSPTRG00000012576 I 0.762
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I 0.762
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I 0.762
TBR1 Monodelphis domestica ENSMODG00000005353 I 0.762
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I 0.762
Tbr1 Mus musculus ENSMUSG00000035033 D 0.762
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I 0.762
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I 0.762
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I 0.762
TBR1 Macaca mulatta ENSMMUG00000011911 I 0.762
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I 0.762
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.762
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I 0.762
TBR1 Bos taurus ENSBTAG00000021692 I 0.762
TBR1 Canis familiaris ENSCAFG00000009984 I 0.762
TBR1 Homo sapiens ENSG00000136535 D 0.762
tbr1 Xenopus tropicalis XB-GENE-942241 I 0.762
TBR1 Gorilla gorilla ENSGGOG00000015752 I 0.762
TBR1 Myotis lucifugus ENSMLUG00000006008 I 0.762
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I 0.762
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I 0.762
TBR1 Loxodonta africana ENSLAFG00000011541 I 0.762
ENSAMXG00000009990 Astyanax mexicanus ENSAMXG00000009990 I 0.759
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I 0.759
tbr1b Danio rerio ENSDARG00000004712 I 0.759
TBR1 Felis catus ENSFCAG00000025073 I 0.759
tbx21 Xenopus tropicalis XB-GENE-479103 I 0.756
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I 0.753
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I 0.753
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I 0.753
tbr1b Oryzias latipes ENSORLG00000016828 I 0.753
tbr1b Takifugu rubripes ENSTRUG00000005183 I 0.753
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I 0.753
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I 0.751
tbr1a Danio rerio ENSDARG00000076259 I 0.751
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.749
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.737
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.737
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I 0.737
eomes.S Xenopus laevis XB-GENE-6487182 I 0.735
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.735
eomes Xenopus tropicalis XB-GENE-479769 I 0.735
EOMES Gallus gallus ENSGALG00000027247 I 0.735
EOMES Anolis carolinensis ENSACAG00000014201 I 0.735
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.735
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.735