CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CJA31001
(
Caenorhabditis japonica
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00352 (TBP)
IPR000814
CJA31001
T342210_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA31001a
TBP
1
59
MNTTNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSESDCRKAARSIARHVQRV
CJA31001a
TBP
71
133
NYRINNVLATCRLPFGIKIEDVAAKYPAESTYEPELSVGLVWRSITPKATLRIHTTGSITVTG
CJA31001b
TBP
1
59
MNTTNVTYEREKGVMMKQKRSPGCYIKVYSSGKVYIVGCRSESDCRKAARSIARHVQRV
CJA31001b
TBP
71
138
NYRINNVLATCRLPFGIKIEDVAAKYPAESTYEPELSVGLVWRSITPKATLRIHTTGSITVTGGIHIF
Links
Other
TBP
family TFs
Other
Caenorhabditis japonica
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_AGL083W
Ashbya gossypii
AGOS_AGL083W
I
CLUG_04669
Candida lusitaniae
CLUG_04669
N
CLUG_04669
Clavispora lusitaniae
CLUG_04669
N
Ecym_7239
Eremothecium cymbalariae
Ecym_7239
I
KNAG_0A07100
Kazachstania naganishii
KNAG_0A07100
I
KLLA0_F25630g
Kluyveromyces lactis
KLLA0_F25630g
N
SAKL0A09856g
Lachancea kluyveri
SAKL0A09856g
I
SU7_2014
Saccharomyces arboricola
SU7_2014
I
666_YBR033W
Saccharomyces bayanus
666_YBR033W
N
14629_YKL038W
Saccharomyces bayanus
14629_YKL038W
I
RGT1
Saccharomyces cerevisiae
YKL038W
D
13522_YKL038W
Saccharomyces mikatae
13522_YKL038W
I
13626_YKL038W
Saccharomyces paradoxus
13626_YKL038W
I
AACERI_AaceriAGL083W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGL083W
I
TPHA_0C04280
Tetrapisispora phaffii
TPHA_0C04280
I
TDEL_0B06360
Torulaspora delbrueckii
TDEL_0B06360
I
Kpol_1002p5
Vanderwaltozyma polyspora
Kpol_1002p5
I
ZBAI_03469
Zygosaccharomyces bailii
ZBAI_03469
I
ZYRO0E05676g
Zygosaccharomyces rouxii
ZYRO0E05676g
I