ENSPMAG00000006175 (Petromyzon marinus)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSPMAG00000006175 T342402_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.964 0.964
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.964 0.964
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.964 0.964
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.964 0.964
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.964 0.964
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.964 0.964
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.964 0.964
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.964 0.964
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.964 0.964
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.964 0.964
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.814 0.814
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.814 0.814
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.814 0.814
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000006805 TBP 115 197
ENSPMAP00000006805 TBP 205 288

Links

Other TBP family TFs
Other Petromyzon marinus TFs

794 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000012673 Ailuropoda melanoleuca ENSAMEG00000012673 I
Alligator_sinensis_CCG000883.1 Alligator sinensis Alligator_sinensis_CCG000883.1 I
RELB Anolis carolinensis ENSACAG00000004079 I
ENSBTAP00000049624-D1 Bos grunniens ENSBTAP00000049624-D1 I
RELB Bos taurus ENSBTAG00000038428 I
RELB Callithrix jacchus ENSCJAG00000012991 I
Aan_R015916 Calypte anna Aan_R015916 I
RELB Canis familiaris ENSCAFG00000004597 I
RELB Cavia porcellus ENSCPOG00000010273 I
ENSCSAG00000003233 Chlorocebus sabaeus ENSCSAG00000003233 I
relb Danio rerio ENSDARG00000086173 N
ENSDNOG00000032456 Dasypus novemcinctus ENSDNOG00000032456 I
Relb Dipodomys ordii ENSDORG00000003448 I
RELB Equus caballus ENSECAG00000020898 I
RELB Felis catus ENSFCAG00000025715 I
ENSGMOG00000014662 Gadus morhua ENSGMOG00000014662 N
rela Gasterosteus aculeatus ENSGACG00000020039 N
RELB Gorilla gorilla ENSGGOG00000003380 I
RELB Homo sapiens ENSG00000104856 D
ENSSTOG00000009056 Ictidomys tridecemlineatus ENSSTOG00000009056 I
ENSSTOG00000027336 Ictidomys tridecemlineatus ENSSTOG00000027336 I
RELB Loxodonta africana ENSLAFG00000008071 I
ENSP00000221452 Macaca fascicularis ENSP00000221452 I
RELB Macaca mulatta ENSMMUG00000014153 I
RELB Microcebus murinus ENSMICG00000006991 I
RELB Monodelphis domestica ENSMODG00000020855 I
Relb Mus musculus ENSMUSG00000002983 D
RELB Myotis lucifugus ENSMLUG00000006593 I
ENSOPRG00000014981 Ochotona princeps ENSOPRG00000014981 I
Ogr08766 Ophisaurus gracilis Ogr08766 I
ENSONIG00000001545 Oreochromis niloticus ENSONIG00000001545 N
CLASRP Oryctolagus cuniculus ENSOCUG00000004711 I
ENSORLG00000011104 Oryzias latipes ENSORLG00000011104 N
ENSORLG00000006786 Oryzias latipes ENSORLG00000006786 N
RELB Otolemur garnettii ENSOGAG00000012777 I
ENSOARG00000009545 Ovis aries ENSOARG00000009545 I
RELB Pan troglodytes ENSPTRG00000011133 I
ENSPANG00000007219 Papio anubis ENSPANG00000007219 I
ENSPSIG00000012895 Pelodiscus sinensis ENSPSIG00000012895 I
ENSPSIG00000013860 Pelodiscus sinensis ENSPSIG00000013860 I
ENSPFOG00000022538 Poecilia formosa ENSPFOG00000022538 N
Pvit_18473 Pogona vitticeps Pvit_18473 I
ENSPPYG00000010103 Pongo abelii ENSPPYG00000010103 I
RELB Procavia capensis ENSPCAG00000010787 I
RELB Pteropus vampyrus ENSPVAG00000015952 I
Relb Rattus norvegicus ENSRNOG00000033235 I
ENSTGUG00000016735 Taeniopygia guttata ENSTGUG00000016735 I
rela Takifugu rubripes ENSTRUG00000008758 N
ENSTRUG00000011348 Takifugu rubripes ENSTRUG00000011348 N
ENSTNIG00000002231 Tetraodon nigroviridis ENSTNIG00000002231 N
ENSTNIG00000007745 Tetraodon nigroviridis ENSTNIG00000007745 N
ENSTNIG00000003566 Tetraodon nigroviridis ENSTNIG00000003566 N
RELB Tupaia belangeri ENSTBEG00000001763 I
RELB Tursiops truncatus ENSTTRG00000015217 I
Tal_R005550 Tyto alba Tal_R005550 I
RELB Vicugna pacos ENSVPAG00000011611 N
relb.S Xenopus laevis XB-GENE-6068550 N
rela.L Xenopus laevis XB-GENE-946512 I
relb Xenopus tropicalis XB-GENE-964072 N
ENSXMAG00000011436 Xiphophorus maculatus ENSXMAG00000011436 N
ENSXMAG00000004297 Xiphophorus maculatus ENSXMAG00000004297 N