HCBG_06828 (Histoplasma capsulatum)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 HCBG_06828 T342620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.916 0.916
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.916 0.916
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.916 0.916
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.820 0.820
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.820 0.820
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.820 0.820
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.820 0.820
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.820 0.820
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.820 0.820
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.820 0.820
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.820 0.820
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.820 0.820
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.820 0.820
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEH04879 TBP 86 168
EEH04879 TBP 176 259

Links

Other TBP family TFs
Other Histoplasma capsulatum TFs

778 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SHN3 Arabidopsis lyrata Al_scaffold_0006_1028 I
SHN2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002026 I
SHN2 Arabidopsis thaliana AT5G11190 D
SHN3 Arabidopsis thaliana AT5G25390 I
Bostr.23997s0014 Boechera stricta Bostr.23997s0014 I
Bostr.29827s0278 Boechera stricta Bostr.29827s0278 I
Bo9g171490 Brassica oleracea Bo9g171490 I
Bo9g011380 Brassica oleracea Bo9g011380 I
Bra036543 Brassica rapa Bra036543 I
Bra008985 Brassica rapa Bra008985 I
Cagra.1110s0005 Capsella grandiflora Cagra.1110s0005 I
Carubv10003050m.g Capsella rubella Carubv10003050m.g I
Carubv10003042m.g Capsella rubella Carubv10003042m.g I
Carubv10002040m.g Capsella rubella Carubv10002040m.g I
evm.TU.supercontig_259.2 Carica papaya evm.TU.supercontig_259.2 I
Ca_01764 Cicer arietinum Ca_01764 I
Ca_09050 Cicer arietinum Ca_09050 I
Cla021283 Citrullus lanatus Cla021283 I
Ciclev10009526m.g Citrus clementina Ciclev10009526m.g I
orange1.1g028913m.g Citrus sinensis orange1.1g028913m.g I
Cucsa.310360 Cucumis sativus Cucsa.310360 I
Thhalv10015363m.g Eutrema salsugineum Thhalv10015363m.g I
Thhalv10005514m.g Eutrema salsugineum Thhalv10005514m.g I
gene11636-v1.0-hybrid Fragaria vesca gene11636-v1.0-hybrid I
GLYMA04G07140 Glycine max GLYMA04G07140 I
GLYMA06G07240 Glycine max GLYMA06G07240 I
GLYMA17G31900 Glycine max GLYMA17G31900 I
Gorai.011G082900 Gossypium raimondii Gorai.011G082900 I
Gorai.010G114800 Gossypium raimondii Gorai.010G114800 I
Gorai.004G292600 Gossypium raimondii Gorai.004G292600 I
Gorai.001G033200 Gossypium raimondii Gorai.001G033200 I
Lus10019414.g Linum usitatissimum Lus10019414.g I
Lus10002912.g Linum usitatissimum Lus10002912.g I
Lus10002015.g Linum usitatissimum Lus10002015.g I
LjSGA_019003.1 Lotus japonicus LjSGA_019003.1 I
MDP0000287350 Malus domestica MDP0000287350 I
MDP0000178263 Malus domestica MDP0000178263 I
cassava10120.m1 Manihot esculenta cassava10120.m1 I
cassava30505.valid.m1 Manihot esculenta cassava30505.valid.m1 I
cassava40012.m1 Manihot esculenta cassava40012.m1 I
MTR_3g107380 Medicago truncatula MTR_3g107380 I
MTR_1g012470 Medicago truncatula MTR_1g012470 I
mgf017744m Mimulus guttatus mgf017744m I
POPTR_0018s01680 Populus trichocarpa POPTR_0018s01680 I
POPTR_0006s26990 Populus trichocarpa POPTR_0006s26990 I
PRUPE_ppa023908mg Prunus persica PRUPE_ppa023908mg I
29848.m004632 Ricinus communis 29848.m004632 I
SapurV1A.0043s0690 Salix purpurea SapurV1A.0043s0690 I
SapurV1A.0192s0020 Salix purpurea SapurV1A.0192s0020 I
PGSC0003DMG400030228 Solanum tuberosum PGSC0003DMG400030228 I
TCM_037007 Theobroma cacao TCM_037007 I
VIT_04s0008g05440 Vitis vinifera VIT_04s0008g05440 I