AFAF020957 (Anopheles farauti)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 AFAF020957 T343345_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.910 0.910
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.910 0.910
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.910 0.910
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.910 0.910
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.910 0.910
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.910 0.910
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.910 0.910
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.910 0.910
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.910 0.910
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.910 0.910
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.825 0.825
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.825 0.825
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.825 0.825
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFAF020957-PA TBP 153 234
AFAF020957-PA TBP 242 325

Links

Other TBP family TFs
Other Anopheles farauti TFs

760 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_06069 Aegilops tauschii F775_06069 I
AMTR_s00022p00128600 Amborella trichopoda AMTR_s00022p00128600 I
Aquca_007_00955 Aquilegia coerulea Aquca_007_00955 I
fgenesh2_kg.1__2281__AT1G20910.1 Arabidopsis lyrata fgenesh2_kg.1__2281__AT1G20910.1 I
fgenesh2_kg.2__1939__AT1G76510.1 Arabidopsis lyrata fgenesh2_kg.2__1939__AT1G76510.1 I
fgenesh2_kg.3__3325__AT2G17410.1 Arabidopsis lyrata fgenesh2_kg.3__3325__AT2G17410.1 I
ARID6 Arabidopsis thaliana AT1G20910 D
AT1G76510 Arabidopsis thaliana AT1G76510 I
ARID3 Arabidopsis thaliana AT2G17410 D
Bostr.18351s0201 Boechera stricta Bostr.18351s0201 I
Bostr.20129s0090 Boechera stricta Bostr.20129s0090 I
Bostr.7128s0681 Boechera stricta Bostr.7128s0681 I
BRADI1G55550 Brachypodium distachyon BRADI1G55550 I
BRADI3G53270 Brachypodium distachyon BRADI3G53270 I
Bo5g030830 Brassica oleracea Bo5g030830 I
Bo6g120610 Brassica oleracea Bo6g120610 I
Bo7g014510 Brassica oleracea Bo7g014510 I
Bo7g061260 Brassica oleracea Bo7g061260 I
Bo8g070520 Brassica oleracea Bo8g070520 I
Bo9g024490 Brassica oleracea Bo9g024490 I
Bra002058 Brassica rapa Bra002058 I
Bra012257 Brassica rapa Bra012257 I
Bra016443 Brassica rapa Bra016443 I
Bra025855 Brassica rapa Bra025855 I
Bra037275 Brassica rapa Bra037275 I
PK02181.1 Cannabis sativa PK02181.1 I
PK12537.1 Cannabis sativa PK12537.1 I
Cagra.2281s0033 Capsella grandiflora Cagra.2281s0033 I
Cagra.6160s0006 Capsella grandiflora Cagra.6160s0006 I
Cagra.6788s0003 Capsella grandiflora Cagra.6788s0003 I
Carubv10009301m.g Capsella rubella Carubv10009301m.g I
Carubv10012979m.g Capsella rubella Carubv10012979m.g I
Carubv10020299m.g Capsella rubella Carubv10020299m.g I
evm.TU.supercontig_26.2 Carica papaya evm.TU.supercontig_26.2 I
Ca_04797 Cicer arietinum Ca_04797 I
Ca_10698 Cicer arietinum Ca_10698 I
Cla009111 Citrullus lanatus Cla009111 I
Ciclev10001099m.g Citrus clementina Ciclev10001099m.g I
Ciclev10025351m.g Citrus clementina Ciclev10025351m.g I
Ciclev10030351m.g Citrus clementina Ciclev10030351m.g I
orange1.1g004663m.g Citrus sinensis orange1.1g004663m.g I
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I
orange1.1g012780m.g Citrus sinensis orange1.1g012780m.g I
Cucsa.323280 Cucumis sativus Cucsa.323280 I
Eucgr.F01815 Eucalyptus grandis Eucgr.F01815 I
Eucgr.I01546 Eucalyptus grandis Eucgr.I01546 I
Eucgr.I02198 Eucalyptus grandis Eucgr.I02198 I
Thhalv10007750m.g Eutrema salsugineum Thhalv10007750m.g I
Thhalv10018578m.g Eutrema salsugineum Thhalv10018578m.g I
Thhalv10022553m.g Eutrema salsugineum Thhalv10022553m.g I
gene12982-v1.0-hybrid Fragaria vesca gene12982-v1.0-hybrid I
gene17116-v1.0-hybrid Fragaria vesca gene17116-v1.0-hybrid I
GLYMA01G36040 Glycine max GLYMA01G36040 I
GLYMA04G01560 Glycine max GLYMA04G01560 I
GLYMA05G10756 Glycine max GLYMA05G10756 I
GLYMA06G01640 Glycine max GLYMA06G01640 I
GLYMA09G32820 Glycine max GLYMA09G32820 I
GLYMA11G09370 Glycine max GLYMA11G09370 I
GLYMA16G21840 Glycine max GLYMA16G21840 I
Gorai.002G112400 Gossypium raimondii Gorai.002G112400 I
Gorai.003G000800 Gossypium raimondii Gorai.003G000800 I
Gorai.012G137700 Gossypium raimondii Gorai.012G137700 I
LPERR02G24480 Leersia perrieri LPERR02G24480 I
LPERR06G17780 Leersia perrieri LPERR06G17780 I
Lus10001618.g Linum usitatissimum Lus10001618.g I
Lus10016045.g Linum usitatissimum Lus10016045.g I
Lus10022981.g Linum usitatissimum Lus10022981.g I
chr1.CM0150.370.nc Lotus japonicus chr1.CM0150.370.nc I
MDP0000188323 Malus domestica MDP0000188323 I
MDP0000834789 Malus domestica MDP0000834789 I
MDP0000890776 Malus domestica MDP0000890776 I
cassava10018.m1 Manihot esculenta cassava10018.m1 I
cassava23401.valid.m1 Manihot esculenta cassava23401.valid.m1 I
cassava24840.valid.m1 Manihot esculenta cassava24840.valid.m1 I
cassava27165.m1 Manihot esculenta cassava27165.m1 I
MTR_3g116200 Medicago truncatula MTR_3g116200 I
MTR_5g024920 Medicago truncatula MTR_5g024920 I
mg023226m Mimulus guttatus mg023226m I
mgf001698m Mimulus guttatus mgf001698m I
mgf002691m Mimulus guttatus mgf002691m I
mgf005009m Mimulus guttatus mgf005009m I
mgf014392m Mimulus guttatus mgf014392m I
GSMUA_Achr3G11660_001 Musa acuminata GSMUA_Achr3G11660_001 I
GSMUA_AchrUn_randomG12940_001 Musa acuminata GSMUA_AchrUn_randomG12940_001 I
OBART02G30070 Oryza barthii OBART02G30070 I
OBART06G21220 Oryza barthii OBART06G21220 I
OB02G37240 Oryza brachyantha OB02G37240 I
OB06G29250 Oryza brachyantha OB06G29250 I
ORGLA02G0256100 Oryza glaberrima ORGLA02G0256100 I
OGLUM02G30740 Oryza glumaepatula OGLUM02G30740 I
OGLUM06G22430 Oryza glumaepatula OGLUM06G22430 I
BGIOSGA005739 Oryza indica BGIOSGA005739 I
BGIOSGA023283 Oryza indica BGIOSGA023283 I
OLONG_022248 Oryza longistaminata OLONG_022248 I
OMERI01G31330 Oryza meridionalis OMERI01G31330 I
OMERI02G28920 Oryza meridionalis OMERI02G28920 I
ONIVA02G32840 Oryza nivara ONIVA02G32840 I
ONIVA06G25180 Oryza nivara ONIVA06G25180 I
OPUNC02G27630 Oryza punctata OPUNC02G27630 I
OPUNC06G19340 Oryza punctata OPUNC06G19340 I
ORUFI02G31730 Oryza rufipogon ORUFI02G31730 I
ORUFI06G22870 Oryza rufipogon ORUFI06G22870 I
OS02G0714300 Oryza sativa OS02G0714300 I
OS06G0622300 Oryza sativa OS06G0622300 I
Pavir.Aa00633 Panicum virgatum Pavir.Aa00633 I
Pavir.Ab03084 Panicum virgatum Pavir.Ab03084 I
Pavir.Db00824 Panicum virgatum Pavir.Db00824 I
PDK_20s1315201g001 Phoenix dactylifera PDK_20s1315201g001 I
PDK_20s1326081g004 Phoenix dactylifera PDK_20s1326081g004 I
e_gw1.66.61.1 Physcomitrella patens e_gw1.66.61.1 I
gw1.131.40.1 Physcomitrella patens gw1.131.40.1 I
POPTR_0001s46070 Populus trichocarpa POPTR_0001s46070 I
POPTR_0002s00550 Populus trichocarpa POPTR_0002s00550 I
POPTR_0004s21870 Populus trichocarpa POPTR_0004s21870 I
POPTR_0011s14850 Populus trichocarpa POPTR_0011s14850 I
Pm020703 Prunus mume Pm020703 I
Pm022898 Prunus mume Pm022898 I
Pm026967 Prunus mume Pm026967 I
PRUPE_ppa001071mg Prunus persica PRUPE_ppa001071mg I
PRUPE_ppa003469mg Prunus persica PRUPE_ppa003469mg I
PRUPE_ppa006712mg Prunus persica PRUPE_ppa006712mg I
29682.m000576 Ricinus communis 29682.m000576 I
30162.m001290 Ricinus communis 30162.m001290 I
30170.m013806 Ricinus communis 30170.m013806 I
SapurV1A.0016s0160 Salix purpurea SapurV1A.0016s0160 I
SapurV1A.0047s0480 Salix purpurea SapurV1A.0047s0480 I
SapurV1A.0478s0090 Salix purpurea SapurV1A.0478s0090 I
SapurV1A.0554s0250 Salix purpurea SapurV1A.0554s0250 I
SELMODRAFT_271464 Selaginella moellendorffii SELMODRAFT_271464 I
SELMODRAFT_445202 Selaginella moellendorffii SELMODRAFT_445202 I
Si006372m.g Setaria italica Si006372m.g I
Si017073m.g Setaria italica Si017073m.g I
Solyc04g082820.2 Solanum lycopersicum Solyc04g082820.2 I
Solyc12g094730.1 Solanum lycopersicum Solyc12g094730.1 I
PGSC0003DMG400010001 Solanum tuberosum PGSC0003DMG400010001 I
PGSC0003DMG400021771 Solanum tuberosum PGSC0003DMG400021771 I
Sb04g029990 Sorghum bicolor Sb04g029990 I
Sb10g024400 Sorghum bicolor Sb10g024400 I
TCM_007605 Theobroma cacao TCM_007605 I
TCM_034809 Theobroma cacao TCM_034809 I
Traes_2AS_49D6010DA1 Triticum aestivum Traes_2AS_49D6010DA1 I
Traes_2BS_B3411790F Triticum aestivum Traes_2BS_B3411790F I
Traes_2DL_C465ACBE4 Triticum aestivum Traes_2DL_C465ACBE4 I
Traes_6AL_D304A3C3B Triticum aestivum Traes_6AL_D304A3C3B I
Traes_6BL_936B5B999 Triticum aestivum Traes_6BL_936B5B999 I
Traes_6DL_E6E385C31 Triticum aestivum Traes_6DL_E6E385C31 I
TRIUR3_34317 Triticum urartu TRIUR3_34317 I
VIT_04s0044g01840 Vitis vinifera VIT_04s0044g01840 I
VIT_18s0122g00560 Vitis vinifera VIT_18s0122g00560 I
GRMZM2G110109 Zea mays GRMZM2G110109 I
GRMZM2G180654 Zea mays GRMZM2G180654 I
GRMZM2G421899 Zea mays GRMZM2G421899 I
GRMZM5G883993 Zea mays GRMZM5G883993 I