AMTR_s00154p00072430 (Amborella trichopoda)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 AMTR_s00154p00072430 T343672_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.933 0.556
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.926 0.528
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.923 0.519
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.909 0.509
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.909 0.509
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.893 0.444
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.893 0.444
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.892 0.463
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.868 0.444
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.864 0.444
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.863 0.426
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.863 0.426
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.863 0.426
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.852 0.417
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.852 0.417
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN07554 TCP 48 226

Links

Other TCP family TFs
Other Amborella trichopoda TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I
AAEL008660 Aedes aegypti AAEL008660 I
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I
PTF1A Anolis carolinensis ENSACAG00000008717 I
AALB002674 Anopheles albimanus AALB002674 I
AARA001906 Anopheles arabiensis AARA001906 I
AATE014019 Anopheles atroparvus AATE014019 I
ACHR004799 Anopheles christyi ACHR004799 I
ACOM034154 Anopheles coluzzii ACOM034154 I
ACUA004590 Anopheles culicifacies ACUA004590 I
ADAC008497 Anopheles darlingi ADAC008497 I
ADIR010545 Anopheles dirus ADIR010545 I
AEPI006242 Anopheles epiroticus AEPI006242 I
AFAF002909 Anopheles farauti AFAF002909 I
AFUN008310 Anopheles funestus AFUN008310 I
AGAP001448 Anopheles gambiae AGAP001448 I
AMAM018725 Anopheles maculatus AMAM018725 I
AMEC009154 Anopheles melas AMEC009154 I
AMEM011331 Anopheles merus AMEM011331 I
AMIN003266 Anopheles minimus AMIN003266 I
AQUA006634 Anopheles quadriannulatus AQUA006634 I
ASIS019386 Anopheles sinensis ASIS019386 I
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I
BGLB003958 Biomphalaria glabrata BGLB003958 I
PTF1A Bos taurus ENSBTAG00000047315 I
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I
PTF1A Callithrix jacchus ENSCJAG00000007862 I
CapteG59283 Capitella teleta CapteG59283 I
PTF1A Cavia porcellus ENSCPOG00000022828 I
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I
CLEC012470 Cimex lectularius CLEC012470 I
csin111295 Clonorchis sinensis csin111295 I
CGI_10017809 Crassostrea gigas CGI_10017809 I
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I
CPIJ006258 Culex quinquefasciatus CPIJ006258 I
KGM_14030 Danaus plexippus KGM_14030 I
ptf1a Danio rerio ENSDARG00000014479 I
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I
YQE_02105 Dendroctonus ponderosae YQE_02105 I
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I
GF17655 Drosophila ananassae FBgn0094673 I
GG13863 Drosophila erecta FBgn0106126 I
GH19006 Drosophila grimshawi FBgn0126473 I
Fer1 Drosophila melanogaster FBgn0037475 D
GI23061 Drosophila mojavensis FBgn0145788 I
GL12422 Drosophila persimilis FBgn0150028 I
GA27498 Drosophila pseudoobscura FBgn0248864 I
GM10936 Drosophila sechellia FBgn0165881 I
GD19915 Drosophila simulans FBgn0191398 I
GJ24574 Drosophila virilis FBgn0211653 I
GK14521 Drosophila willistoni FBgn0216527 I
GE24907 Drosophila yakuba FBgn0242002 I
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I
PTF1A Equus caballus ENSECAG00000012711 I
D915_00775 Fasciola hepatica D915_00775 I
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I
PTF1A Gorilla gorilla ENSGGOG00000015210 I
HelroG86431 Helobdella robusta HelroG86431 I
PTF1A Homo sapiens ENSG00000168267 D
HmN_000218700 Hymenolepis microstoma HmN_000218700 I
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I
ISCW003737 Ixodes scapularis ISCW003737 I
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I
LDEC016362 Leptinotarsa decemlineata LDEC016362 I
LotgiG66849 Lottia gigantea LotgiG66849 I
PTF1A Loxodonta africana ENSLAFG00000012682 I
LCUP002382 Lucilia cuprina LCUP002382 I
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I
MESCA008421 Megaselia scalaris MESCA008421 I
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I
PTF1A Monodelphis domestica ENSMODG00000008946 I
Ptf1a Mus musculus ENSMUSG00000026735 D
PTF1A Myotis lucifugus ENSMLUG00000010122 I
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I
T265_12589 Opisthorchis viverrini T265_12589 I
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I
ptf1a Oryzias latipes ENSORLG00000008277 I
PTF1A Otolemur garnettii ENSOGAG00000024685 I
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I
PHUM498120 Pediculus humanus PHUM498120 I
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I
PPAI005132 Phlebotomus papatasi PPAI005132 I
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I
Pvit_04136 Pogona vitticeps Pvit_04136 I
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I
PTF1A Procavia capensis ENSPCAG00000005440 I
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I
Ptf1a Rattus norvegicus ENSRNOG00000016902 I
RPRC001881 Rhodnius prolixus RPRC001881 I
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I
SMU15024587 Schmidtea mediterranea SMU15024587 I
SMU15028020 Schmidtea mediterranea SMU15028020 I
SMU15033768 Schmidtea mediterranea SMU15033768 I
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I
SMAR009985 Strigamia maritima SMAR009985 I
SMAR011911 Strigamia maritima SMAR011911 I
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I
PTF1A Sus scrofa ENSSSCG00000030662 I
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I
ptf1a Takifugu rubripes ENSTRUG00000007713 I
TC014105 Tribolium castaneum TC014105 I
D917_00545 Trichinella nativa D917_00545 I
EFV58245 Trichinella spiralis EFV58245 I
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I
D918_01499 Trichuris suis D918_01499 I
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I
PTF1A Tupaia belangeri ENSTBEG00000005210 I
PTF1A Tursiops truncatus ENSTTRG00000016843 I
ptf1a.S Xenopus laevis XB-GENE-6466546 I
ptf1a Xenopus tropicalis XB-GENE-484425 I
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I
L798_11980 Zootermopsis nevadensis L798_11980 I