GSMUA_Achr8G19990_001 (Musa acuminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GSMUA_Achr8G19990_001 T343988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.952 0.674
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.952 0.674
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.952 0.674
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.948 0.684
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.946 0.684
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.933 0.632
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.897 0.495
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.891 0.484
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.889 0.474
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.887 0.474
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.835 0.463
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.835 0.463
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.830 0.453
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P19990_001 TCP 60 197

Links

Other TCP family TFs
Other Musa acuminata TFs

403 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01517 Acanthocheilonema viteae nAv.1.0.1.g01517 I
ANCCAN_03696 Ancylostoma caninum ANCCAN_03696 I
ASIM_0001558001 Anisakis simplex ASIM_0001558001 I
ALUE_0000232801 Ascaris lumbricoides ALUE_0000232801 I
ASU_04180 Ascaris suum ASU_04180 I
Bm2663 Brugia malayi Bm2663 I
BTMF_0001276401 Brugia timori BTMF_0001276401 I
CBN10543 Caenorhabditis brenneri CBN10543 I
CBG17980 Caenorhabditis briggsae CBG17980 I
pal-1 Caenorhabditis elegans WBGene00003912 D
CJA02391 Caenorhabditis japonica CJA02391 I
CRE20227 Caenorhabditis remanei CRE20227 I
nDi.2.2.2.g06197 Dirofilaria immitis nDi.2.2.2.g06197 I
EVEC_0000579401 Enterobius vermicularis EVEC_0000579401 I
HCOI01745700 Haemonchus contortus HCOI01745700 I
HPLM_0000060301 Haemonchus placei HPLM_0000060301 I
HPBE_0001563701 Heligmosomoides bakeri HPBE_0001563701 I
nLs.2.1.2.g09719 Litomosoides sigmodontis nLs.2.1.2.g09719 I
LOAG_15485 Loa loa LOAG_15485 I
ENSMODG00000025439 Monodelphis domestica ENSMODG00000025439 I
NECAME_06333 Necator americanus NECAME_06333 I
NBR_0000825001 Nippostrongylus brasiliensis NBR_0000825001 I
OESDEN_19696 Oesophagostomum dentatum OESDEN_19696 I
OFLC_0000632501 Onchocerca flexuosa OFLC_0000632501 I
WBGene00246390 Onchocerca volvulus WBGene00246390 I
PTRK_0001336600 Parastrongyloides trichosuri PTRK_0001336600 I
Ppa-pal-1 Pristionchus pacificus PPA02358 I
RSKR_0001046900 Rhabditophanes kr3021 RSKR_0001046900 I
SPAL_0001492700 Strongyloides papillosus SPAL_0001492700 I
SSTP_0000576200 Strongyloides stercoralis SSTP_0000576200 I
SVE_0397300 Strongyloides venezuelensis SVE_0397300 I
SVUK_0001504901 Strongylus vulgaris SVUK_0001504901 I
SMUV_0000918401 Syphacia muris SMUV_0000918401 I
TCLT_0000255601 Thelazia callipaeda TCLT_0000255601 I
TCNE_0001280701 Toxocara canis TCNE_0001280701 I
EFV58119 Trichinella spiralis EFV58119 I
WUBG_02562 Wuchereria bancrofti WUBG_02562 I