MTR_4g079580 (Medicago truncatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 MTR_4g079580 T344040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.936 0.412
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.935 0.412
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.933 0.386
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.933 0.386
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.933 0.386
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.922 0.405
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.898 0.359
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.888 0.373
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.888 0.373
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.844 0.288
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES89752 TCP 20 295

Links

Other TCP family TFs
Other Medicago truncatula TFs

382 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I 0.000
AT3G11100 Arabidopsis thaliana AT3G11100 I 0.000
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I 0.000
BRADI3G46210 Brachypodium distachyon BRADI3G46210 N 0.000
Bo5g136850 Brassica oleracea Bo5g136850 I 0.000
Bra034165 Brassica rapa Bra034165 I 0.000
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.000
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I 0.000
MLOC_58439 Hordeum vulgare MLOC_58439 N 0.000
LPERR02G17010 Leersia perrieri LPERR02G17010 N 0.000
MDP0000097759 Malus domestica MDP0000097759 N 0.000
MDP0000943251 Malus domestica MDP0000943251 N 0.000
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.000
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.000
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.000
Pavir.J27535 Panicum virgatum Pavir.J27535 N 0.000
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.000
29814.m000741 Ricinus communis 29814.m000741 I 0.000
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.000
Sb06g017920 Sorghum bicolor Sb06g017920 N 0.000
Traes_6AL_7A4395C60 Triticum aestivum Traes_6AL_7A4395C60 N 0.000
Traes_6DL_C27CEED76 Triticum aestivum Traes_6DL_C27CEED76 N 0.000
GRMZM2G392168 Zea mays GRMZM2G392168 N 0.000