PGSC0003DMG400022964 (Solanum tuberosum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 PGSC0003DMG400022964 T344267_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.919 0.426
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.905 0.426
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.905 0.426
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.905 0.426
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.905 0.411
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.905 0.411
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.878 0.349
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.878 0.349
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.875 0.357
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.875 0.357
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.865 0.372
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.855 0.349
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.848 0.357
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.839 0.357
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.839 0.357
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.828 0.326
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400059117 TCP 91 219

Links

Other TCP family TFs
Other Solanum tuberosum TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003626 Ailuropoda melanoleuca ENSAMEG00000003626 I
ENSAMEG00000008932 Ailuropoda melanoleuca ENSAMEG00000008932 I
Alligator_sinensis_CCG013281.1 Alligator sinensis Alligator_sinensis_CCG013281.1 I
Alligator_sinensis_CCG017455.1 Alligator sinensis Alligator_sinensis_CCG017455.1 I
ENSAPLG00000010915 Anas platyrhynchos ENSAPLG00000010915 I
ARID5B Anolis carolinensis ENSACAG00000010922 I
GB52601 Apis mellifera GB52601 I
Afo_R009473 Aptenodytes forsteri Afo_R009473 I
ENSAMXG00000005409 Astyanax mexicanus ENSAMXG00000005409 I
ENSAMXG00000006897 Astyanax mexicanus ENSAMXG00000006897 I
ENSAMXG00000012004 Astyanax mexicanus ENSAMXG00000012004 I
ACEP16450 Atta cephalotes ACEP16450 I
ENSBTAP00000008847-D1 Bos grunniens ENSBTAP00000008847-D1 I
ENSBTAP00000026200-D1 Bos grunniens ENSBTAP00000026200-D1 I
ARID5B Bos taurus ENSBTAG00000006729 I
ARID5A Bos taurus ENSBTAG00000014090 I
fgenesh2_pg.scaffold_164000022 Branchiostoma floridae fgenesh2_pg.scaffold_164000022 I
Brh_R002693 Buceros rhinoceros Brh_R002693 I
ARID5B Callithrix jacchus ENSCJAG00000007072 I
ARID5A Callithrix jacchus ENSCJAG00000007759 I
Aan_R006833 Calypte anna Aan_R006833 I
Cflo_07446--XP_395512.3_APIME Camponotus floridanus Cflo_07446--XP_395512.3_APIME I
ARID5A Canis familiaris ENSCAFG00000006546 I
ARID5B Canis familiaris ENSCAFG00000012991 I
CapteG220448 Capitella teleta CapteG220448 I
ENSCPOG00000003685 Cavia porcellus ENSCPOG00000003685 I
ARID5A Cavia porcellus ENSCPOG00000026444 I
Cmyd_10001620 Chelonia mydas Cmyd_10001620 I
Cmyd_10021475 Chelonia mydas Cmyd_10021475 I
ENSCSAG00000007410 Chlorocebus sabaeus ENSCSAG00000007410 I
ENSCSAG00000017355 Chlorocebus sabaeus ENSCSAG00000017355 I
ARID5B Choloepus hoffmanni ENSCHOG00000011695 I
ENSCING00000013307 Ciona intestinalis ENSCING00000013307 I
arid5b Danio rerio ENSDARG00000037196 I
zgc:77151 Danio rerio ENSDARG00000054307 I
arid6 Danio rerio ENSDARG00000069988 D
arid5a Danio rerio ENSDARG00000077120 I
ARID5A Dasypus novemcinctus ENSDNOG00000035690 I
ARID5B Dasypus novemcinctus ENSDNOG00000043861 I
Arid5a Dipodomys ordii ENSDORG00000002540 I
ARID5B Echinops telfairi ENSETEG00000002612 I
ARID5B Equus caballus ENSECAG00000019795 I
ARID5B Erinaceus europaeus ENSEEUG00000000691 I
ARID5A Erinaceus europaeus ENSEEUG00000008247 I
ARID5A Felis catus ENSFCAG00000024950 I
ARID5B Felis catus ENSFCAG00000026767 I
ENSFALG00000000299 Ficedula albicollis ENSFALG00000000299 I
ENSFALG00000013304 Ficedula albicollis ENSFALG00000013304 I
ENSGMOG00000004984 Gadus morhua ENSGMOG00000004984 I
ENSGMOG00000008075 Gadus morhua ENSGMOG00000008075 I
ENSGALG00000002991 Gallus gallus ENSGALG00000002991 I
ENSGALG00000027335 Gallus gallus ENSGALG00000027335 I
arid5b Gasterosteus aculeatus ENSGACG00000010603 I
ENSGACG00000015846 Gasterosteus aculeatus ENSGACG00000015846 I
Gfo_R015732 Geospiza fortis Gfo_R015732 I
ARID5B Gorilla gorilla ENSGGOG00000004127 I
ARID5A Gorilla gorilla ENSGGOG00000017068 I
Hsal_01506--XP_395512.3_APIME Harpegnathos saltator Hsal_01506--XP_395512.3_APIME I
ARID5B Homo sapiens ENSG00000150347 D
ARID5A Homo sapiens ENSG00000196843 I
ENSSTOG00000019546 Ictidomys tridecemlineatus ENSSTOG00000019546 I
ENSSTOG00000023423 Ictidomys tridecemlineatus ENSSTOG00000023423 I
ISCW010123 Ixodes scapularis ISCW010123 I
ENSLACG00000014124 Latimeria chalumnae ENSLACG00000014124 I
ENSLACG00000015032 Latimeria chalumnae ENSLACG00000015032 I
ENSLOCG00000005151 Lepisosteus oculatus ENSLOCG00000005151 I
ENSLOCG00000006809 Lepisosteus oculatus ENSLOCG00000006809 I
ENSLOCG00000012316 Lepisosteus oculatus ENSLOCG00000012316 I
ENSLOCG00000015055 Lepisosteus oculatus ENSLOCG00000015055 I
ARID5A Loxodonta africana ENSLAFG00000009162 I
ARID5B Loxodonta africana ENSLAFG00000015576 I
ENSP00000279873 Macaca fascicularis ENSP00000279873 I
ARID5B Macaca mulatta ENSMMUG00000000424 I
ARID5A Macaca mulatta ENSMMUG00000030744 I
ENSMEUG00000005354 Macropus eugenii ENSMEUG00000005354 I
ENSMEUG00000014406 Macropus eugenii ENSMEUG00000014406 I
ARID5B Meleagris gallopavo ENSMGAG00000003626 I
ENSMICG00000010866 Microcebus murinus ENSMICG00000010866 I
ARID5A Monodelphis domestica ENSMODG00000008611 I
ARID5B Monodelphis domestica ENSMODG00000017102 I
ENSMPUG00000008907 Mustela putorius furo ENSMPUG00000008907 I
ENSMPUG00000011076 Mustela putorius furo ENSMPUG00000011076 I
Arid5b Mus musculus ENSMUSG00000019947 D
Arid5a Mus musculus ENSMUSG00000037447 D
Myotis_brandtii_ARID5A_10013684 Myotis brandtii Myotis_brandtii_ARID5A_10013684 I
Myotis_brandtii_ARID5B_10031403 Myotis brandtii Myotis_brandtii_ARID5B_10031403 I
ARID5A Myotis lucifugus ENSMLUG00000003208 I
ARID5B Myotis lucifugus ENSMLUG00000013447 I
NV18117 Nasonia vitripennis NV18117 I
NEMVEDRAFT_v1g81183 Nematostella vectensis NEMVEDRAFT_v1g81183 I
ENSNLEG00000012110 Nomascus leucogenys ENSNLEG00000012110 I
ARID5A Ochotona princeps ENSOPRG00000015571 I
Ocbimv22018673m.g Octopus bimaculoides Ocbimv22018673m.g I
Ogr03010 Ophisaurus gracilis Ogr03010 I
Ogr08677 Ophisaurus gracilis Ogr08677 I
ENSONIG00000000889 Oreochromis niloticus ENSONIG00000000889 I
ENSONIG00000010644 Oreochromis niloticus ENSONIG00000010644 I
ARID5B Ornithorhynchus anatinus ENSOANG00000015260 I
ARID5A Oryctolagus cuniculus ENSOCUG00000012101 I
ARID5B Oryctolagus cuniculus ENSOCUG00000027029 I
ENSORLG00000004756 Oryzias latipes ENSORLG00000004756 I
ENSORLG00000011620 Oryzias latipes ENSORLG00000011620 I
ENSORLG00000018351 Oryzias latipes ENSORLG00000018351 I
ARID5A Otolemur garnettii ENSOGAG00000004116 I
ARID5B Otolemur garnettii ENSOGAG00000015939 I
ENSOARG00000004403 Ovis aries ENSOARG00000004403 I
ARID5B Pan troglodytes ENSPTRG00000002534 I
ARID5A Pan troglodytes ENSPTRG00000012234 I
ENSPANG00000012565 Papio anubis ENSPANG00000012565 I
ENSPANG00000022067 Papio anubis ENSPANG00000022067 I
e_gw.4.260.1_CONSTRUCT PBM CONSTRUCTS e_gw.4.260.1_CONSTRUCT D
ENSPSIG00000010908 Pelodiscus sinensis ENSPSIG00000010908 I
ENSPSIG00000014127 Pelodiscus sinensis ENSPSIG00000014127 I
ENSPMAG00000002699 Petromyzon marinus ENSPMAG00000002699 I
ENSPMAG00000009067 Petromyzon marinus ENSPMAG00000009067 I
ENSPFOG00000010024 Poecilia formosa ENSPFOG00000010024 I
ENSPFOG00000012334 Poecilia formosa ENSPFOG00000012334 I
ENSPFOG00000012795 Poecilia formosa ENSPFOG00000012795 I
ENSPFOG00000022560 Poecilia formosa ENSPFOG00000022560 I
Pvit_18395 Pogona vitticeps Pvit_18395 I
ENSPPYG00000002417 Pongo abelii ENSPPYG00000002417 I
ENSPPYG00000012072 Pongo abelii ENSPPYG00000012072 I
ARID5B Procavia capensis ENSPCAG00000002044 I
ARID5A Procavia capensis ENSPCAG00000006363 I
ARID5A Pteropus vampyrus ENSPVAG00000009400 I
ARID5B Pteropus vampyrus ENSPVAG00000010482 I
Arid5a Rattus norvegicus ENSRNOG00000015382 D
Sakowv30045810m.g Saccoglossus kowalevskii Sakowv30045810m.g I
ENSSHAG00000012252 Sarcophilus harrisii ENSSHAG00000012252 I
ENSSHAG00000018209 Sarcophilus harrisii ENSSHAG00000018209 I
SINV22144 Solenopsis invicta SINV22144 I
ARID5B Sorex araneus ENSSARG00000002423 I
SMAR000821 Strigamia maritima SMAR000821 I
SPU_011640 Strongylocentrotus purpuratus SPU_011640 I
ARID5A Sus scrofa ENSSSCG00000008123 I
ARID5B Sus scrofa ENSSSCG00000010219 I
ARID5B Taeniopygia guttata ENSTGUG00000005270 I
ENSTGUG00000015609 Taeniopygia guttata ENSTGUG00000015609 I
ENSTRUG00000001547 Takifugu rubripes ENSTRUG00000001547 I
arid5b Takifugu rubripes ENSTRUG00000010671 I
ENSTSYG00000010758 Tarsius syrichta ENSTSYG00000010758 I
tetur19g00310 Tetranychus urticae tetur19g00310 I
ENSTNIG00000006278 Tetraodon nigroviridis ENSTNIG00000006278 I
arid5b Tetraodon nigroviridis ENSTNIG00000007478 I
ENSTNIG00000013457 Tetraodon nigroviridis ENSTNIG00000013457 I
ARID5A Tursiops truncatus ENSTTRG00000007812 I
Tal_R007047 Tyto alba Tal_R007047 I
arid5b Xenopus tropicalis XB-GENE-1007579 I
ENSXMAG00000001883 Xiphophorus maculatus ENSXMAG00000001883 I
ENSXMAG00000011937 Xiphophorus maculatus ENSXMAG00000011937 I
ENSXMAG00000018209 Xiphophorus maculatus ENSXMAG00000018209 I
L798_01524 Zootermopsis nevadensis L798_01524 I