CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARID5B
(
Bos taurus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
ENSBTAG00000006729
T014450_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arid5b
M01661_2.00
Mus musculus
NDATWHNN
NNDWATHN
PBM
Weirauch et al.(2014)
pTH4426
0.785
1.000
ARID5B
M08707_2.00
Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C
0.785
1.000
Arid5b
M08708_2.00
Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH
Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C
0.785
1.000
ARID5B
M09767_2.00
Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM
Transfac
Matys et al.(2006)
V$MRF2_01
0.785
1.000
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN
NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.632
0.744
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN
NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.632
0.744
arid6
M01657_2.00
Danio rerio
NNRWATYN
NRATWYNN
PBM
Weirauch et al.(2014)
pTH5120
0.605
0.605
e_gw.4.260.1_CONSTRUCT
M01668_2.00
PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN
PBM
Weirauch et al.(2014)
pTH5122
0.482
0.593
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000008847
ARID/BRIGHT
323
409
DEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYE
Links
Other
ARID/BRIGHT
family TFs
Other
Bos taurus
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARID5B
Anolis carolinensis
ENSACAG00000010922
I
0.785
ENSAMEG00000003626
Ailuropoda melanoleuca
ENSAMEG00000003626
I
0.785
ENSAPLG00000010915
Anas platyrhynchos
ENSAPLG00000010915
I
0.785
ARID5B
Canis familiaris
ENSCAFG00000012991
I
0.785
ARID5B
Choloepus hoffmanni
ENSCHOG00000011695
I
0.785
ARID5B
Callithrix jacchus
ENSCJAG00000007072
I
0.785
ENSCPOG00000003685
Cavia porcellus
ENSCPOG00000003685
I
0.785
ENSCSAG00000007410
Chlorocebus sabaeus
ENSCSAG00000007410
I
0.785
ARID5B
Dasypus novemcinctus
ENSDNOG00000043861
I
0.785
ARID5B
Equus caballus
ENSECAG00000019795
I
0.785
ARID5B
Erinaceus europaeus
ENSEEUG00000000691
I
0.785
ARID5B
Echinops telfairi
ENSETEG00000002612
I
0.785
ENSFALG00000013304
Ficedula albicollis
ENSFALG00000013304
I
0.785
ARID5B
Felis catus
ENSFCAG00000026767
I
0.785
ARID5B
Homo sapiens
ENSG00000150347
D
0.785
ENSGALG00000002991
Gallus gallus
ENSGALG00000002991
I
0.785
ARID5B
Gorilla gorilla
ENSGGOG00000004127
I
0.785
ENSLACG00000015032
Latimeria chalumnae
ENSLACG00000015032
I
0.785
ARID5B
Loxodonta africana
ENSLAFG00000015576
I
0.785
ARID5B
Meleagris gallopavo
ENSMGAG00000003626
I
0.785
ENSMICG00000010866
Microcebus murinus
ENSMICG00000010866
I
0.785
ARID5B
Myotis lucifugus
ENSMLUG00000013447
I
0.785
ARID5B
Macaca mulatta
ENSMMUG00000000424
I
0.785
ARID5B
Monodelphis domestica
ENSMODG00000017102
I
0.785
ENSMPUG00000011076
Mustela putorius furo
ENSMPUG00000011076
I
0.785
Arid5b
Mus musculus
ENSMUSG00000019947
D
0.785
ENSNLEG00000012110
Nomascus leucogenys
ENSNLEG00000012110
I
0.785
ARID5B
Ornithorhynchus anatinus
ENSOANG00000015260
I
0.785
ENSOARG00000004403
Ovis aries
ENSOARG00000004403
I
0.785
ARID5B
Oryctolagus cuniculus
ENSOCUG00000027029
I
0.785
ARID5B
Otolemur garnettii
ENSOGAG00000015939
I
0.785
ENSPANG00000022067
Papio anubis
ENSPANG00000022067
I
0.785
ARID5B
Procavia capensis
ENSPCAG00000002044
I
0.785
ENSPSIG00000010908
Pelodiscus sinensis
ENSPSIG00000010908
I
0.785
ARID5B
Pan troglodytes
ENSPTRG00000002534
I
0.785
ARID5B
Pteropus vampyrus
ENSPVAG00000010482
I
0.785
ARID5B
Sorex araneus
ENSSARG00000002423
I
0.785
ENSSHAG00000012252
Sarcophilus harrisii
ENSSHAG00000012252
I
0.785
ARID5B
Sus scrofa
ENSSSCG00000010219
I
0.785
ARID5B
Taeniopygia guttata
ENSTGUG00000005270
I
0.785
ENSTSYG00000010758
Tarsius syrichta
ENSTSYG00000010758
I
0.785
Aan_R006833
Calypte anna
Aan_R006833
I
0.785
Afo_R009473
Aptenodytes forsteri
Afo_R009473
I
0.785
Alligator_sinensis_CCG017455.1
Alligator sinensis
Alligator_sinensis_CCG017455.1
I
0.785
Brh_R002693
Buceros rhinoceros
Brh_R002693
I
0.785
Cmyd_10021475
Chelonia mydas
Cmyd_10021475
I
0.785
ENSBTAP00000008847-D1
Bos grunniens
ENSBTAP00000008847-D1
I
0.785
ENSP00000279873
Macaca fascicularis
ENSP00000279873
I
0.785
Gfo_R015732
Geospiza fortis
Gfo_R015732
I
0.785
Myotis_brandtii_ARID5B_10031403
Myotis brandtii
Myotis_brandtii_ARID5B_10031403
I
0.785
Ogr08677
Ophisaurus gracilis
Ogr08677
I
0.785
Pvit_18395
Pogona vitticeps
Pvit_18395
I
0.785
Tal_R007047
Tyto alba
Tal_R007047
I
0.785
arid5b
Xenopus tropicalis
XB-GENE-1007579
I
0.785
ENSPPYG00000002417
Pongo abelii
ENSPPYG00000002417
I
0.767
ENSAMXG00000012004
Astyanax mexicanus
ENSAMXG00000012004
I
0.760
arid5b
Danio rerio
ENSDARG00000037196
I
0.760
ENSLOCG00000006809
Lepisosteus oculatus
ENSLOCG00000006809
I
0.760
ENSMEUG00000005354
Macropus eugenii
ENSMEUG00000005354
I
0.743
arid5b
Gasterosteus aculeatus
ENSGACG00000010603
I
0.738
ENSGMOG00000004984
Gadus morhua
ENSGMOG00000004984
I
0.738
ENSONIG00000000889
Oreochromis niloticus
ENSONIG00000000889
I
0.738
ENSORLG00000004756
Oryzias latipes
ENSORLG00000004756
I
0.738
ENSPFOG00000012334
Poecilia formosa
ENSPFOG00000012334
I
0.738
arid5b
Tetraodon nigroviridis
ENSTNIG00000007478
I
0.738
arid5b
Takifugu rubripes
ENSTRUG00000010671
I
0.738
ENSXMAG00000018209
Xiphophorus maculatus
ENSXMAG00000018209
I
0.738
arid5a
Danio rerio
ENSDARG00000077120
I
0.660
ENSPMAG00000002699
Petromyzon marinus
ENSPMAG00000002699
I
0.658
ENSLACG00000014124
Latimeria chalumnae
ENSLACG00000014124
I
0.648
ENSGACG00000015846
Gasterosteus aculeatus
ENSGACG00000015846
I
0.646
Alligator_sinensis_CCG013281.1
Alligator sinensis
Alligator_sinensis_CCG013281.1
I
0.646
ENSAMEG00000008932
Ailuropoda melanoleuca
ENSAMEG00000008932
I
0.632
ARID5A
Bos taurus
ENSBTAG00000014090
I
0.632
ARID5A
Canis familiaris
ENSCAFG00000006546
I
0.632
ARID5A
Callithrix jacchus
ENSCJAG00000007759
I
0.632
ARID5A
Cavia porcellus
ENSCPOG00000026444
I
0.632
ENSCSAG00000017355
Chlorocebus sabaeus
ENSCSAG00000017355
I
0.632
ARID5A
Dasypus novemcinctus
ENSDNOG00000035690
I
0.632
Arid5a
Dipodomys ordii
ENSDORG00000002540
I
0.632
ARID5A
Equus caballus
ENSECAG00000023667
I
0.632
ARID5A
Erinaceus europaeus
ENSEEUG00000008247
I
0.632
ARID5A
Felis catus
ENSFCAG00000024950
I
0.632
ARID5A
Homo sapiens
ENSG00000196843
I
0.632
ARID5A
Gorilla gorilla
ENSGGOG00000017068
I
0.632
ARID5A
Loxodonta africana
ENSLAFG00000009162
I
0.632
ENSMEUG00000014406
Macropus eugenii
ENSMEUG00000014406
I
0.632
ARID5A
Myotis lucifugus
ENSMLUG00000003208
I
0.632
ARID5A
Monodelphis domestica
ENSMODG00000008611
I
0.632
ENSMPUG00000008907
Mustela putorius furo
ENSMPUG00000008907
I
0.632
Arid5a
Mus musculus
ENSMUSG00000037447
D
0.632
ARID5A
Otolemur garnettii
ENSOGAG00000004116
I
0.632
ENSPANG00000012565
Papio anubis
ENSPANG00000012565
I
0.632
ARID5A
Procavia capensis
ENSPCAG00000006363
I
0.632
ENSPPYG00000012072
Pongo abelii
ENSPPYG00000012072
I
0.632
ENSPSIG00000014127
Pelodiscus sinensis
ENSPSIG00000014127
I
0.632
ARID5A
Pan troglodytes
ENSPTRG00000012234
I
0.632
ARID5A
Pteropus vampyrus
ENSPVAG00000009400
I
0.632
Arid5a
Rattus norvegicus
ENSRNOG00000015382
D
0.632
ENSSHAG00000018209
Sarcophilus harrisii
ENSSHAG00000018209
I
0.632
ARID5A
Sus scrofa
ENSSSCG00000008123
I
0.632
ENSSTOG00000019546
Ictidomys tridecemlineatus
ENSSTOG00000019546
I
0.632
ARID5A
Tursiops truncatus
ENSTTRG00000007812
I
0.632
Cmyd_10001620
Chelonia mydas
Cmyd_10001620
I
0.632
Myotis_brandtii_ARID5A_10013684
Myotis brandtii
Myotis_brandtii_ARID5A_10013684
I
0.632
ENSAMXG00000005409
Astyanax mexicanus
ENSAMXG00000005409
I
0.627
ENSLOCG00000015055
Lepisosteus oculatus
ENSLOCG00000015055
I
0.627
Ogr03010
Ophisaurus gracilis
Ogr03010
I
0.619
ENSORLG00000018351
Oryzias latipes
ENSORLG00000018351
I
0.616
ENSTRUG00000001547
Takifugu rubripes
ENSTRUG00000001547
I
0.616
ENSPFOG00000022560
Poecilia formosa
ENSPFOG00000022560
I
0.613
ENSXMAG00000011937
Xiphophorus maculatus
ENSXMAG00000011937
I
0.613
arid6
Danio rerio
ENSDARG00000069988
D
0.605
ENSLOCG00000005151
Lepisosteus oculatus
ENSLOCG00000005151
I
0.605
ENSTNIG00000013457
Tetraodon nigroviridis
ENSTNIG00000013457
I
0.599
ARID5A
Ochotona princeps
ENSOPRG00000015571
I
0.593
ENSGMOG00000008075
Gadus morhua
ENSGMOG00000008075
I
0.592
ENSONIG00000010644
Oreochromis niloticus
ENSONIG00000010644
I
0.590
ENSORLG00000011620
Oryzias latipes
ENSORLG00000011620
I
0.590
ENSPFOG00000012795
Poecilia formosa
ENSPFOG00000012795
I
0.590
ENSTNIG00000006278
Tetraodon nigroviridis
ENSTNIG00000006278
I
0.590
ENSXMAG00000001883
Xiphophorus maculatus
ENSXMAG00000001883
I
0.590
ENSPMAG00000009067
Petromyzon marinus
ENSPMAG00000009067
I
0.586
ENSFALG00000000299
Ficedula albicollis
ENSFALG00000000299
I
0.583
ENSGALG00000027335
Gallus gallus
ENSGALG00000027335
I
0.583
ENSTGUG00000015609
Taeniopygia guttata
ENSTGUG00000015609
I
0.583
ENSAMXG00000006897
Astyanax mexicanus
ENSAMXG00000006897
I
0.578
zgc:77151
Danio rerio
ENSDARG00000054307
I
0.578
ENSPFOG00000010024
Poecilia formosa
ENSPFOG00000010024
I
0.578
NV18117
Nasonia vitripennis
NV18117
I
0.568
ENSSTOG00000023423
Ictidomys tridecemlineatus
ENSSTOG00000023423
I
0.559
ARID5A
Macaca mulatta
ENSMMUG00000030744
I
0.558
SMAR000821
Strigamia maritima
SMAR000821
I
0.554
L798_01524
Zootermopsis nevadensis
L798_01524
I
0.552
ISCW010123
Ixodes scapularis
ISCW010123
I
0.550
Ocbimv22018673m.g
Octopus bimaculoides
Ocbimv22018673m.g
I
0.544
Sakowv30045810m.g
Saccoglossus kowalevskii
Sakowv30045810m.g
I
0.543
SPU_011640
Strongylocentrotus purpuratus
SPU_011640
I
0.538
GB52601
Apis mellifera
GB52601
I
0.530
Cflo_07446--XP_395512.3_APIME
Camponotus floridanus
Cflo_07446--XP_395512.3_APIME
I
0.530
Hsal_01506--XP_395512.3_APIME
Harpegnathos saltator
Hsal_01506--XP_395512.3_APIME
I
0.530
CapteG220448
Capitella teleta
CapteG220448
I
0.501
ENSCING00000013307
Ciona intestinalis
ENSCING00000013307
I
0.494
NEMVEDRAFT_v1g81183
Nematostella vectensis
NEMVEDRAFT_v1g81183
I
0.482
e_gw.4.260.1_CONSTRUCT
PBM CONSTRUCTS
e_gw.4.260.1_CONSTRUCT
D
0.482
fgenesh2_pg.scaffold_164000022
Branchiostoma floridae
fgenesh2_pg.scaffold_164000022
I
0.455
tetur19g00310
Tetranychus urticae
tetur19g00310
I
0.443
ENSLOCG00000012316
Lepisosteus oculatus
ENSLOCG00000012316
I
0.431
ARID5A
Oryctolagus cuniculus
ENSOCUG00000012101
I
0.428