MDP0000247249 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000247249 T344929_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.834 0.756
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000247249 TCP 55 99

Links

Other TCP family TFs
Other Malus domestica TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18470 Aegilops tauschii F775_18470 I 0.836
TCP10 Arabidopsis lyrata scaffold_401627.1 I 0.828
Bostr.24513s0122 Boechera stricta Bostr.24513s0122 I 0.843
BRADI2G50687 Brachypodium distachyon BRADI2G50687 I 0.827
BRADI2G20060 Brachypodium distachyon BRADI2G20060 I 0.829
Cagra.2935s0020 Capsella grandiflora Cagra.2935s0020 I 0.825
Carubv10005003m.g Capsella rubella Carubv10005003m.g I 0.825
LjT20A21.20.nc Lotus japonicus LjT20A21.20.nc D 0.834
MDP0000623166 Malus domestica MDP0000623166 N 0.930
MDP0000617746 Malus domestica MDP0000617746 I 0.872
MDP0000388684 Malus domestica MDP0000388684 I 0.824
MDP0000373350 Malus domestica MDP0000373350 I 0.872
MDP0000253526 Malus domestica MDP0000253526 I 0.872
MDP0000249507 Malus domestica MDP0000249507 I 0.823
MDP0000202241 Malus domestica MDP0000202241 I 0.859
MDP0000199422 Malus domestica MDP0000199422 I 0.872
MDP0000130524 Malus domestica MDP0000130524 I 0.872
OBART05G22490 Oryza barthii OBART05G22490 I 0.947
OB07G12490 Oryza brachyantha OB07G12490 N 0.875
OLONG_000443 Oryza longistaminata OLONG_000443 N 0.904
ONIVA06G04550 Oryza nivara ONIVA06G04550 N 0.841
Pavir.Ea02793 Panicum virgatum Pavir.Ea02793 I 0.843
PRUPE_ppa024046mg Prunus persica PRUPE_ppa024046mg N 0.831
SELMODRAFT_89227 Selaginella moellendorffii SELMODRAFT_89227 I 0.860
SELMODRAFT_7330 Selaginella moellendorffii SELMODRAFT_7330 I 0.906
SELMODRAFT_28794 Selaginella moellendorffii SELMODRAFT_28794 I 0.897
SELMODRAFT_104521 Selaginella moellendorffii SELMODRAFT_104521 I 0.860
Si002496m.g Setaria italica Si002496m.g I 0.860
Sb02g013020 Sorghum bicolor Sb02g013020 N 0.888
Traes_2AS_1A307CE26 Triticum aestivum Traes_2AS_1A307CE26 N 0.860
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.840