ORGLA03G0251700 (Oryza glaberrima)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 ORGLA03G0251700 T345660_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.789
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.776
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.763
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.763
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.750
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.750
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.750
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.750
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.750
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.671
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.592
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.579
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.579
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.579
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.579
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.579
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.566
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.553
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.539
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.513
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.513
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.513
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.513
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.500
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.500
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.500
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.487
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.487
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0251700.1 TCR/CxC 461 498
ORGLA03G0251700.1 TCR/CxC 547 584

Links

Other TCR/CxC family TFs
Other Oryza glaberrima TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CTHT_0016110 Chaetomium thermophilum CTHT_0016110 N 0.000
CFIO01_13633 Colletotrichum fioriniae CFIO01_13633 I 0.000
CGGC5_12854 Colletotrichum gloeosporioides CGGC5_12854 I 0.000
CH063_01030 Colletotrichum higginsianum CH063_01030 I 0.000
Cob_08365 Colletotrichum orbiculare Cob_08365 I 0.000
FFUJ_01862 Fusarium fujikuroi FFUJ_01862 I 0.000
FGRRES_01638 Fusarium graminearum FGRRES_01638 I 0.000
FOXG_11065 Fusarium oxysporum FOXG_11065 I 0.000
FPSE_09752 Fusarium pseudograminearum FPSE_09752 I 0.000
NechaG98518 Fusarium solani NechaG98518 I 0.000
FVEG_09736 Fusarium verticillioides FVEG_09736 I 0.000
GGTG_04497 Gaeumannomyces graminis GGTG_04497 I 0.000
CMQ_6814 Grosmannia clavigera CMQ_6814 I 0.000
MAC_05787 Metarhizium acridum MAC_05787 I 0.000
MAM_06565 Metarhizium album MAM_06565 I 0.000
MANI_019125 Metarhizium anisopliae MANI_019125 I 0.000
MBR_06676 Metarhizium brunneum MBR_06676 I 0.000
MGU_09148 Metarhizium guizhouense MGU_09148 I 0.000
MAJ_07700 Metarhizium majus MAJ_07700 I 0.000
X797_008956 Metarhizium robertsii X797_008956 I 0.000
estExt_fgenesh1_pg.C_sca_8_chr1_1_00138 Nectria haematococca estExt_fgenesh1_pg.C_sca_8_chr1_1_00138 I 0.000
NCU05411 Neurospora crassa NCU05411 D 0.000
estExt_Genewise1Plus.C_110569 Neurospora discreta estExt_Genewise1Plus.C_110569 I 0.000
NEUTE1DRAFT_102079 Neurospora tetrasperma NEUTE1DRAFT_102079 I 0.000
F503_00471 Ophiostoma piceae uamh F503_00471 I 0.000
PFICI_14901 Pestalotiopsis fici PFICI_14901 I 0.000
SMAC_04150 Sordaria macrospora SMAC_04150 I 0.000
SPBR_04045 Sporothrix brasiliensis SPBR_04045 N 0.000
HMPREF1624_08666 Sporothrix schenckii HMPREF1624_08666 N 0.000
THITE_2124588 Thielavia terrestris THITE_2124588 I 0.000
VHEMI01959 Torrubiella hemipterigena VHEMI01959 I 0.000
VDAG_07704 Verticillium dahliae VDAG_07704 I 0.000