Thhalv10019058m.g (Eutrema salsugineum)
Whirly

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08536 (Whirly) IPR013742 Thhalv10019058m.g T350650_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10019058m Whirly 65 200
Thhalv10019065m Whirly 64 199

Links

Other Whirly family TFs
Other Eutrema salsugineum TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATWHY2 Arabidopsis lyrata scaffold_202038.1 N 0.875
WHY2 Arabidopsis thaliana AT1G71260 N 0.875
Bostr.10273s0220 Boechera stricta Bostr.10273s0220 N 0.860
Bo6g112840 Brassica oleracea Bo6g112840 N 0.801
Bra016150 Brassica rapa Bra016150 N 0.809
Cagra.0147s0016 Capsella grandiflora Cagra.0147s0016 N 0.897
Carubv10020880m.g Capsella rubella Carubv10020880m.g N 0.904
evm.TU.supercontig_249.9 Carica papaya evm.TU.supercontig_249.9 N 0.765
orange1.1g026312m.g Citrus sinensis orange1.1g026312m.g N 0.709
Eucgr.K01091 Eucalyptus grandis Eucgr.K01091 N 0.772
GLYMA19G43880 Glycine max GLYMA19G43880 N 0.716
MLOC_19666 Hordeum vulgare MLOC_19666 N 0.750
Lus10035067.g Linum usitatissimum Lus10035067.g N 0.743
Lus10017892.g Linum usitatissimum Lus10017892.g N 0.743
chr1.LjT14G19.90.nc Lotus japonicus chr1.LjT14G19.90.nc N 0.721
MDP0000168614 Malus domestica MDP0000168614 N 0.794
cassava9653.m1 Manihot esculenta cassava9653.m1 N 0.769
cassava24783.valid.m1 Manihot esculenta cassava24783.valid.m1 N 0.721
MTR_7g116270 Medicago truncatula MTR_7g116270 N 0.716
mgf015710m Mimulus guttatus mgf015710m N 0.743
ATWHY2 Populus trichocarpa POPTR_0003s04700 N 0.777
Pm022821 Prunus mume Pm022821 N 0.757
PRUPE_ppa011529mg Prunus persica PRUPE_ppa011529mg N 0.750
SapurV1A.0002s0060 Salix purpurea SapurV1A.0002s0060 N 0.794
Solyc11g044750.1 Solanum lycopersicum Solyc11g044750.1 N 0.757
PGSC0003DMG400022930 Solanum tuberosum PGSC0003DMG400022930 N 0.814
TCM_035992 Theobroma cacao TCM_035992 N 0.706