CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo6g112840
(
Brassica oleracea
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08536 (Whirly)
IPR013742
Bo6g112840
T350478_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g112840.1
Whirly
61
196
IFKGRAALSVEPVLPTFTKIEPGNLRIDRRGSVMMTFMPAVSERKYDWEKKQLFALSPTEVGSVISMGPQDSSEFFHDPSMKSSNAGQVRKSLSIKPLADSTGYFFQLSVTDNIQNSNDRIVVPVSKAEFAVLKSA
Links
Other
Whirly
family TFs
Other
Brassica oleracea
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra016150
Brassica rapa
Bra016150
N
0.993
Thhalv10019058m.g
Eutrema salsugineum
Thhalv10019058m.g
N
0.801
ATWHY2
Arabidopsis lyrata
scaffold_202038.1
N
0.794
WHY2
Arabidopsis thaliana
AT1G71260
N
0.787
Carubv10020880m.g
Capsella rubella
Carubv10020880m.g
N
0.787
Cagra.0147s0016
Capsella grandiflora
Cagra.0147s0016
N
0.779
Bostr.10273s0220
Boechera stricta
Bostr.10273s0220
N
0.772
MLOC_19666
Hordeum vulgare
MLOC_19666
N
0.767
ATWHY2
Populus trichocarpa
POPTR_0003s04700
N
0.723
SapurV1A.0002s0060
Salix purpurea
SapurV1A.0002s0060
N
0.706