gene13173-v1.0-hybrid (Fragaria vesca)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 gene13173-v1.0-hybrid T356207_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY27
M02566_2.00 		Arabidopsis thaliana
NNGTCHDNN
NNHDGACNN		 PBM
Weirauch et al.(2014)
pTH8188 		0.887 0.881
WRKY27
M07430_2.00 		Arabidopsis thaliana
MAAAGTCAACKNH
DNMGTTGACTTTK		 Dap-seq
OMalley et al.(2016)
WRKY27_col_a 		0.887 0.881
WRKY27
M07431_2.00 		Arabidopsis thaliana
HAAAGTCAACKNH
DNMGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a 		0.887 0.881
WRKY14
M00731_2.00 		Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN		 PBM
Chang et al.(2013)
pTH7570 		0.878 0.831
WRKY14
M07375_2.00 		Arabidopsis thaliana
NAAAGTCAACGNN
NNCGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY14_col_a 		0.878 0.831
WRKY14
M07376_2.00 		Arabidopsis thaliana
NAAAGTCAACGNH
DNCGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a 		0.878 0.831
WRKY65
M07372_2.00 		Arabidopsis thaliana
NWWAGTCAACG
CGTTGACTWWN		 Dap-seq
OMalley et al.(2016)
WRKY65_col_a 		0.876 0.746
WRKY65
M07373_2.00 		Arabidopsis thaliana
NAAAGTCAACGN
NCGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a 		0.876 0.746
WRKY22
M02557_2.00 		Arabidopsis thaliana
NNNKTMHDNN
NNHDKAMNNN		 PBM
Weirauch et al.(2014)
pTH7320 		0.869 0.763
WRKY22
M07400_2.00 		Arabidopsis thaliana
AAAAGTCAACKNH
DNMGTTGACTTTT		 Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a 		0.869 0.763
WRKY22
M07401_2.00 		Arabidopsis thaliana
NAAAGTCAACKNH
DNMGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY22_col 		0.869 0.763
WRKY29
M02558_2.00 		Arabidopsis thaliana
NNNGTCHDNN
NNHDGACNNN		 PBM
Weirauch et al.(2014)
pTH9604 		0.860 0.712
WRKY29
M07410_2.00 		Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY29_col_a 		0.860 0.712
WRKY29
M07411_2.00 		Arabidopsis thaliana
HWWAGTCAAMDNN
NNHKTTGACTWWD		 Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a 		0.860 0.712
WRKY15
M02549_2.00 		Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN		 PBM
Weirauch et al.(2014)
pTH7602 		0.859 0.661
WRKY15
M07383_2.00 		Arabidopsis thaliana
AAAAGTCAACKN
NMGTTGACTTTT		 Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a 		0.859 0.661
WRKY15
M07384_2.00 		Arabidopsis thaliana
NWAAGTCAACB
VGTTGACTTWN		 Dap-seq
OMalley et al.(2016)
WRKY15_col_b 		0.859 0.661
WRKY7
M07412_2.00 		Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV
BCGTTGACTTTKNNNNHHHNN		 Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a 		0.857 0.678
WRKY7
M07413_2.00 		Arabidopsis thaliana
NAAAAGTCAACKNN
NNMGTTGACTTTTN		 Dap-seq
OMalley et al.(2016)
WRKY7_col 		0.857 0.678
Q40828_PETCR
M11467_2.00 		Petroselinum crispum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY_Q2 		0.857 0.661
WRKY21
M02553_2.00 		Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7422 		0.853 0.661
WRKY21
M07389_2.00 		Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a 		0.853 0.661
WRKY21
M07390_2.00 		Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_col 		0.853 0.661
WRKY11
M02559_2.00 		Arabidopsis thaliana
NDGTCAAHNN
NNDTTGACHN		 PBM
Weirauch et al.(2014)
pTH8091 		0.852 0.644
WRKY11
M07415_2.00 		Arabidopsis thaliana
NHAAAGTCAACBNH
DNVGTTGACTTTDN		 Dap-seq
OMalley et al.(2016)
WRKY11_col_a 		0.852 0.644
WRKY11
M11464_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY11_Q2 		0.852 0.644
WRKY17
M02550_2.00 		Arabidopsis thaliana
NNDGTCAAHN
NDTTGACHNN		 PBM
Weirauch et al.(2014)
pTH8088 		0.849 0.627
WRKY17
M07385_2.00 		Arabidopsis thaliana
NHAAAGTCAACRNN
NNYGTTGACTTTDN		 Dap-seq
OMalley et al.(2016)
WRKY17_col_a 		0.849 0.627
WRKY17
M07386_2.00 		Arabidopsis thaliana
NMAAAGTCAACGN
NCGTTGACTTTKN		 Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a 		0.849 0.627
WRKY48
M02565_2.00 		Arabidopsis thaliana
NNVGTCADNN
NNHTGACBNN		 PBM
Weirauch et al.(2014)
pTH7552 		0.827 0.559
WRKY28
M07406_2.00 		Arabidopsis thaliana
HAAAGTCAAMNNH
DNNKTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY28_col_a 		0.825 0.525
WRKY28
M07407_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a 		0.825 0.525
WRKY8
M02564_2.00 		Arabidopsis thaliana
NRGTCAAHN
NDTTGACYN		 PBM
Weirauch et al.(2014)
pTH7554 		0.825 0.508
WRKY8
M07428_2.00 		Arabidopsis thaliana
NAAAAGTCAACRNHW
WDNYGTTGACTTTTN		 Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a 		0.825 0.508
WRKY8
M07429_2.00 		Arabidopsis thaliana
NNVAAAGTCAACRNH
DNYGTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY8_col 		0.825 0.508
WRKY71
M07374_2.00 		Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY71_col_a 		0.824 0.525
ZAP1
M00982_2.00 		Arabidopsis thaliana
NRGTCAAN
NTTGACYN		 PBM
Lindemose et al.(2014)
WRKY1 		0.821 0.559
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00 		Ostreococcus tauri
NRGTCARNN
NNYTGACYN		 PBM
Weirauch et al.(2014)
pTH9432 		0.818 0.559
WRKY57
M02547_2.00 		Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7917 		0.814 0.525
WRKY23
M02556_2.00 		Arabidopsis thaliana
RGTCAACG
CGTTGACY		 PBM
Weirauch et al.(2014)
pTH7387 		0.813 0.542
WRKY23
M01089_2.00 		Arabidopsis thaliana
NRGTCAAM
KTTGACYN		 PBM
Sullivan et al.(2014)
pTH7671 		0.813 0.542
WRKY59
M07382_2.00 		Arabidopsis thaliana
NDWWAGTCAAMN
NKTTGACTWWHN		 Dap-seq
OMalley et al.(2016)
WRKY59_col_a 		0.812 0.492
WRKY50
M07424_2.00 		Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN		 Dap-seq
OMalley et al.(2016)
WRKY50_col_a 		0.811 0.525
WRKY50
M07425_2.00 		Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN		 Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a 		0.811 0.525
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13173.1-v1.0-hybrid WRKY 229 287

Links

Other WRKY family TFs
Other Fragaria vesca TFs

1624 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I
AAEL008660 Aedes aegypti AAEL008660 I
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I
PTF1A Anolis carolinensis ENSACAG00000008717 I
AALB002674 Anopheles albimanus AALB002674 I
AARA001906 Anopheles arabiensis AARA001906 I
AATE014019 Anopheles atroparvus AATE014019 I
ACHR004799 Anopheles christyi ACHR004799 I
ACOM034154 Anopheles coluzzii ACOM034154 I
ACUA004590 Anopheles culicifacies ACUA004590 I
ADAC008497 Anopheles darlingi ADAC008497 I
ADIR010545 Anopheles dirus ADIR010545 I
AEPI006242 Anopheles epiroticus AEPI006242 I
AFAF002909 Anopheles farauti AFAF002909 I
AFUN008310 Anopheles funestus AFUN008310 I
AGAP001448 Anopheles gambiae AGAP001448 I
AMAM018725 Anopheles maculatus AMAM018725 I
AMEC009154 Anopheles melas AMEC009154 I
AMEM011331 Anopheles merus AMEM011331 I
AMIN003266 Anopheles minimus AMIN003266 I
AQUA006634 Anopheles quadriannulatus AQUA006634 I
ASIS019386 Anopheles sinensis ASIS019386 I
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I
BGLB003958 Biomphalaria glabrata BGLB003958 I
PTF1A Bos taurus ENSBTAG00000047315 I
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I
PTF1A Callithrix jacchus ENSCJAG00000007862 I
CapteG59283 Capitella teleta CapteG59283 I
PTF1A Cavia porcellus ENSCPOG00000022828 I
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I
CLEC012470 Cimex lectularius CLEC012470 I
csin111295 Clonorchis sinensis csin111295 I
CGI_10017809 Crassostrea gigas CGI_10017809 I
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I
CPIJ006258 Culex quinquefasciatus CPIJ006258 I
KGM_14030 Danaus plexippus KGM_14030 I
ptf1a Danio rerio ENSDARG00000014479 I
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I
YQE_02105 Dendroctonus ponderosae YQE_02105 I
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I
GF17655 Drosophila ananassae FBgn0094673 I
GG13863 Drosophila erecta FBgn0106126 I
GH19006 Drosophila grimshawi FBgn0126473 I
Fer1 Drosophila melanogaster FBgn0037475 D
GL12422 Drosophila persimilis FBgn0150028 I
GA27498 Drosophila pseudoobscura FBgn0248864 I
GM10936 Drosophila sechellia FBgn0165881 I
GD19915 Drosophila simulans FBgn0191398 I
GJ24574 Drosophila virilis FBgn0211653 I
GK14521 Drosophila willistoni FBgn0216527 I
GE24907 Drosophila yakuba FBgn0242002 I
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I
PTF1A Equus caballus ENSECAG00000012711 I
D915_00775 Fasciola hepatica D915_00775 I
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I
PTF1A Gorilla gorilla ENSGGOG00000015210 I
HelroG86431 Helobdella robusta HelroG86431 I
PTF1A Homo sapiens ENSG00000168267 D
HmN_000218700 Hymenolepis microstoma HmN_000218700 I
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I
ISCW003737 Ixodes scapularis ISCW003737 I
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I
LDEC016362 Leptinotarsa decemlineata LDEC016362 I
LotgiG66849 Lottia gigantea LotgiG66849 I
PTF1A Loxodonta africana ENSLAFG00000012682 I
LCUP002382 Lucilia cuprina LCUP002382 I
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I
MESCA008421 Megaselia scalaris MESCA008421 I
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I
PTF1A Monodelphis domestica ENSMODG00000008946 I
MDOA013156 Musca domestica MDOA013156 I
Ptf1a Mus musculus ENSMUSG00000026735 D
PTF1A Myotis lucifugus ENSMLUG00000010122 I
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I
T265_12589 Opisthorchis viverrini T265_12589 I
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I
ptf1a Oryzias latipes ENSORLG00000008277 I
PTF1A Otolemur garnettii ENSOGAG00000024685 I
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I
PHUM498120 Pediculus humanus PHUM498120 I
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I
PPAI005132 Phlebotomus papatasi PPAI005132 I
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I
Pvit_04136 Pogona vitticeps Pvit_04136 I
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I
PTF1A Procavia capensis ENSPCAG00000005440 I
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I
Ptf1a Rattus norvegicus ENSRNOG00000016902 I
RPRC001881 Rhodnius prolixus RPRC001881 I
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I
SMU15024587 Schmidtea mediterranea SMU15024587 I
SMU15028020 Schmidtea mediterranea SMU15028020 I
SMU15033768 Schmidtea mediterranea SMU15033768 I
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I
SMAR009985 Strigamia maritima SMAR009985 I
SMAR011911 Strigamia maritima SMAR011911 I
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I
PTF1A Sus scrofa ENSSSCG00000030662 I
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I
ptf1a Takifugu rubripes ENSTRUG00000007713 I
TC014105 Tribolium castaneum TC014105 I
D917_00545 Trichinella nativa D917_00545 I
EFV58245 Trichinella spiralis EFV58245 I
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I
D918_01499 Trichuris suis D918_01499 I
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I
PTF1A Tupaia belangeri ENSTBEG00000005210 I
PTF1A Tursiops truncatus ENSTTRG00000016843 I
ptf1a.S Xenopus laevis XB-GENE-6466546 I
ptf1a Xenopus tropicalis XB-GENE-484425 I
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I
L798_11980 Zootermopsis nevadensis L798_11980 I