COCSADRAFT_26363 (Bipolaris sorokiniana)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 COCSADRAFT_26363 T365249_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
aod-2
M02599_2.00 		Neurospora crassa
NNNNCGGRN
NYCCGNNNN		 PBM
Weirauch et al.(2014)
pTH8944 		0.549 0.886
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMD64187 Zinc cluster 49 85

Links

Other Zinc cluster family TFs
Other Bipolaris sorokiniana TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04216 Aegilops tauschii F775_04216 N 0.000
BRADI1G72330 Brachypodium distachyon BRADI1G72330 N 0.000
MLOC_71395 Hordeum vulgare MLOC_71395 N 0.000
LPERR03G05580 Leersia perrieri LPERR03G05580 N 0.000
OBART03G06210 Oryza barthii OBART03G06210 N 0.000
OB03G16290 Oryza brachyantha OB03G16290 N 0.000
ORGLA03G0060000 Oryza glaberrima ORGLA03G0060000 N 0.000
OGLUM03G06210 Oryza glumaepatula OGLUM03G06210 N 0.000
BGIOSGA011321 Oryza indica BGIOSGA011321 N 0.000
OLONG_002463 Oryza longistaminata OLONG_002463 N 0.000
ONIVA02G06710 Oryza nivara ONIVA02G06710 N 0.000
ORUFI03G06050 Oryza rufipogon ORUFI03G06050 N 0.000
OS03G0184500 Oryza sativa OS03G0184500 N 0.000
Pavir.Ia04169 Panicum virgatum Pavir.Ia04169 N 0.000
Pavir.Ib00539 Panicum virgatum Pavir.Ib00539 N 0.000
Si037266m.g Setaria italica Si037266m.g N 0.000
Sb01g044910 Sorghum bicolor Sb01g044910 N 0.000
Traes_4AS_A7507A8AF Triticum aestivum Traes_4AS_A7507A8AF N 0.000
Traes_4DL_58F3F93CA Triticum aestivum Traes_4DL_58F3F93CA N 0.000
TRIUR3_04216 Triticum urartu TRIUR3_04216 N 0.000
GRMZM2G109480 Zea mays GRMZM2G109480 N 0.000
GRMZM2G028794 Zea mays GRMZM2G028794 N 0.000