CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G109480
(
Zea mays
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GRMZM2G109480
T019402_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G109480_P01
B3
46
137
FVKAMLHSHVVRGFWLGLPSHFCDTYMPKQDATITLVDEKDEEFDTNYLAYKKGLSGGWAGFALYHAIQDGDSTVFQLIKPTTFKVHIVRAA
GRMZM2G109480_P02
B3
139
230
FVKAMLHSHVVRGFWLGLPSHFCDTYMPKQDATITLVDEKDEEFDTNYLAYKKGLSGGWAGFALYHAIQDGDSTVFQLIKPTTFKVHIVRAA
GRMZM2G109480_P03
B3
139
230
FVKAMLHSHVVRGFWLGLPSHFCDTYMPKQDATITLVDEKDEEFDTNYLAYKKGLSGGWAGFALYHAIQDGDSTVFQLIKPTTFKVLHAFSE
Links
Other
B3
family TFs
Other
Zea mays
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ia04169
Panicum virgatum
Pavir.Ia04169
N
0.902
GRMZM2G028794
Zea mays
GRMZM2G028794
N
0.891
Si037266m.g
Setaria italica
Si037266m.g
N
0.891
Pavir.Ib00539
Panicum virgatum
Pavir.Ib00539
N
0.880
BRADI1G72330
Brachypodium distachyon
BRADI1G72330
N
0.848
Sb01g044910
Sorghum bicolor
Sb01g044910
N
0.848
F775_04216
Aegilops tauschii
F775_04216
N
0.837
Traes_4AS_A7507A8AF
Triticum aestivum
Traes_4AS_A7507A8AF
N
0.837
Traes_4BL_87A0339AD
Triticum aestivum
Traes_4BL_87A0339AD
N
0.837
Traes_4DL_58F3F93CA
Triticum aestivum
Traes_4DL_58F3F93CA
N
0.837
TRIUR3_04216
Triticum urartu
TRIUR3_04216
N
0.837
MLOC_71395
Hordeum vulgare
MLOC_71395
N
0.826
LPERR03G05580
Leersia perrieri
LPERR03G05580
N
0.815
OB03G16290
Oryza brachyantha
OB03G16290
N
0.815
BGIOSGA011321
Oryza indica
BGIOSGA011321
N
0.783
OBART03G06210
Oryza barthii
OBART03G06210
N
0.783
OGLUM03G06210
Oryza glumaepatula
OGLUM03G06210
N
0.783
OLONG_002463
Oryza longistaminata
OLONG_002463
N
0.783
ONIVA02G06710
Oryza nivara
ONIVA02G06710
N
0.783
ORGLA03G0060000
Oryza glaberrima
ORGLA03G0060000
N
0.783
ORUFI03G06050
Oryza rufipogon
ORUFI03G06050
N
0.783
OS03G0184500
Oryza sativa
OS03G0184500
N
0.783
OMERI03G06040
Oryza meridionalis
OMERI03G06040
N
0.739
OPUNC03G06010
Oryza punctata
OPUNC03G06010
N
0.709