Pavir.Ia04169 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Ia04169 T023907_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia04169.1.p B3 74 165

Links

Other B3 family TFs
Other Panicum virgatum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si037266m.g Setaria italica Si037266m.g N 0.967
Pavir.Ib00539 Panicum virgatum Pavir.Ib00539 N 0.957
GRMZM2G028794 Zea mays GRMZM2G028794 N 0.924
GRMZM2G109480 Zea mays GRMZM2G109480 N 0.902
Sb01g044910 Sorghum bicolor Sb01g044910 N 0.880
LPERR03G05580 Leersia perrieri LPERR03G05580 N 0.837
OB03G16290 Oryza brachyantha OB03G16290 N 0.837
BRADI1G72330 Brachypodium distachyon BRADI1G72330 N 0.815
BGIOSGA011321 Oryza indica BGIOSGA011321 N 0.804
OBART03G06210 Oryza barthii OBART03G06210 N 0.804
OGLUM03G06210 Oryza glumaepatula OGLUM03G06210 N 0.804
OLONG_002463 Oryza longistaminata OLONG_002463 N 0.804
ONIVA02G06710 Oryza nivara ONIVA02G06710 N 0.804
ORGLA03G0060000 Oryza glaberrima ORGLA03G0060000 N 0.804
ORUFI03G06050 Oryza rufipogon ORUFI03G06050 N 0.804
OS03G0184500 Oryza sativa OS03G0184500 N 0.804
F775_04216 Aegilops tauschii F775_04216 N 0.793
Traes_4AS_A7507A8AF Triticum aestivum Traes_4AS_A7507A8AF N 0.793
Traes_4BL_87A0339AD Triticum aestivum Traes_4BL_87A0339AD N 0.793
Traes_4DL_58F3F93CA Triticum aestivum Traes_4DL_58F3F93CA N 0.793
TRIUR3_04216 Triticum urartu TRIUR3_04216 N 0.793
MLOC_71395 Hordeum vulgare MLOC_71395 N 0.783
OMERI03G06040 Oryza meridionalis OMERI03G06040 N 0.761
OPUNC03G06010 Oryza punctata OPUNC03G06010 N 0.733