CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF12g01741
(
Pseudozyma brasiliensis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PSEUBRA_SCAF12g01741
T379450_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST09188
Zinc cluster
34
71
LSCLQCRKRKTRCDKKYPCSPCVIRGDASSCTQVQQTI
Links
Other
Zinc cluster
family TFs
Other
Pseudozyma brasiliensis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK03938.1
Cannabis sativa
PK03938.1
N
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
Ciclev10025376m.g
Citrus clementina
Ciclev10025376m.g
N
orange1.1g010160m.g
Citrus sinensis
orange1.1g010160m.g
N
Eucgr.H01651
Eucalyptus grandis
Eucgr.H01651
N
Eucgr.H02009
Eucalyptus grandis
Eucgr.H02009
N
GLYMA17G20175
Glycine max
GLYMA17G20175
N
Gorai.007G212100
Gossypium raimondii
Gorai.007G212100
N
MDP0000258417
Malus domestica
MDP0000258417
N
MDP0000314333
Malus domestica
MDP0000314333
N
TCM_000597
Theobroma cacao
TCM_000597
N