CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g010160m.g
(
Citrus sinensis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
orange1.1g010160m.g
T023730_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g010160m
B3
144
235
FAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRAN
orange1.1g012926m
B3
81
172
FAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRAN
orange1.1g012931m
B3
81
172
FAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRAN
orange1.1g013945m
B3
61
152
FAKSMVRSHVASCFWMGLPGYFCKSHLPDKDTSVVLEDESGIQYTAKYFAEKTGLSAGWRQFSTAHNLVEGDVLVFQLIAPLKLKVYIIRAN
Links
Other
B3
family TFs
Other
Citrus sinensis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10025376m.g
Citrus clementina
Ciclev10025376m.g
N
1.000
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
0.761
Gorai.007G212100
Gossypium raimondii
Gorai.007G212100
N
0.739
MDP0000258417
Malus domestica
MDP0000258417
N
0.739
PK03938.1
Cannabis sativa
PK03938.1
N
0.739
GLYMA17G20175
Glycine max
GLYMA17G20175
N
0.728
TCM_000597
Theobroma cacao
TCM_000597
N
0.717
MDP0000314333
Malus domestica
MDP0000314333
N
0.717
Eucgr.H01651
Eucalyptus grandis
Eucgr.H01651
N
0.707
Eucgr.H02009
Eucalyptus grandis
Eucgr.H02009
N
0.707