CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G212100
(
Gossypium raimondii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Gorai.007G212100
T023350_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G212100.1
B3
161
252
FAKSLVRSHVGSCFWMGLPGMFCKIHLPRKDTTITLEDESGNQFHVKYYADKTGLSAGWRQFCSAHNLLEGDVLVFQLVEPTKFKIYIIRAN
Gorai.007G212100.2
B3
127
218
FAKSLVRSHVGSCFWMGLPGMFCKIHLPRKDTTITLEDESGNQFHVKYYADKTGLSAGWRQFCSAHNLLEGDVLVFQLVEPTKFKIYIIRAN
Gorai.007G212100.3
B3
37
128
FAKSLVRSHVGSCFWMGLPGMFCKIHLPRKDTTITLEDESGNQFHVKYYADKTGLSAGWRQFCSAHNLLEGDVLVFQLVEPTKFKIYIIRAN
Gorai.007G212100.4
B3
161
252
FAKSLVRSHVGSCFWMGLPGMFCKIHLPRKDTTITLEDESGNQFHVKYYADKTGLSAGWRQFCSAHNLLEGDVLVFQLVEPTKFKIYIIRAN
Links
Other
B3
family TFs
Other
Gossypium raimondii
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_000597
Theobroma cacao
TCM_000597
N
0.924
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
0.848
PK03938.1
Cannabis sativa
PK03938.1
N
0.815
cassava2445.valid.m1
Manihot esculenta
cassava2445.valid.m1
N
0.804
MDP0000258417
Malus domestica
MDP0000258417
N
0.783
Eucgr.H01651
Eucalyptus grandis
Eucgr.H01651
N
0.772
Eucgr.H02009
Eucalyptus grandis
Eucgr.H02009
N
0.772
MDP0000314333
Malus domestica
MDP0000314333
N
0.772
GLYMA17G20175
Glycine max
GLYMA17G20175
N
0.761
VIT_07s0031g00780
Vitis vinifera
VIT_07s0031g00780
N
0.750
30115.m001183
Ricinus communis
30115.m001183
N
0.739
Ciclev10025376m.g
Citrus clementina
Ciclev10025376m.g
N
0.739
gene24052-v1.0-hybrid
Fragaria vesca
gene24052-v1.0-hybrid
N
0.739
orange1.1g010160m.g
Citrus sinensis
orange1.1g010160m.g
N
0.739
Solyc02g090710.2
Solanum lycopersicum
Solyc02g090710.2
N
0.728
PGSC0003DMG400015771
Solanum tuberosum
PGSC0003DMG400015771
N
0.717
Lus10035416.g
Linum usitatissimum
Lus10035416.g
N
0.717
MDP0000236656
Malus domestica
MDP0000236656
N
0.717
LjSGA_111419.1
Lotus japonicus
LjSGA_111419.1
N
0.717
POPTR_0007s11170
Populus trichocarpa
POPTR_0007s11170
N
0.707
Cucsa.366830
Cucumis sativus
Cucsa.366830
N
0.705