CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene24052-v1.0-hybrid
(
Fragaria vesca
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
gene24052-v1.0-hybrid
T023245_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna24052.1-v1.0-hybrid
B3
1956
2047
FVKSLLRSHVASCFWMGLPSLFCKSHLPDKDITMTLEDEGGRQLQSKYIACKTGLSAGWRQFAASHKLLEGDVLVFQLVEPAKFKVYVIRSN
Links
Other
B3
family TFs
Other
Fragaria vesca
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000258417
Malus domestica
MDP0000258417
N
0.913
MDP0000314333
Malus domestica
MDP0000314333
N
0.913
MDP0000236656
Malus domestica
MDP0000236656
N
0.837
PK03938.1
Cannabis sativa
PK03938.1
N
0.804
GLYMA17G20175
Glycine max
GLYMA17G20175
N
0.783
Ca_09273
Cicer arietinum
Ca_09273
N
0.778
Pm026415
Prunus mume
Pm026415
N
0.750
evm.TU.supercontig_55.163
Carica papaya
evm.TU.supercontig_55.163
N
0.750
Cla020495
Citrullus lanatus
Cla020495
N
0.739
Cucsa.366830
Cucumis sativus
Cucsa.366830
N
0.739
Gorai.007G212100
Gossypium raimondii
Gorai.007G212100
N
0.739
LjSGA_111419.1
Lotus japonicus
LjSGA_111419.1
N
0.739
VIT_07s0031g00780
Vitis vinifera
VIT_07s0031g00780
N
0.717
cassava2445.valid.m1
Manihot esculenta
cassava2445.valid.m1
N
0.717
PGSC0003DMG400015771
Solanum tuberosum
PGSC0003DMG400015771
N
0.707
Solyc02g090710.2
Solanum lycopersicum
Solyc02g090710.2
N
0.707
TCM_000597
Theobroma cacao
TCM_000597
N
0.707
Eucgr.H01651
Eucalyptus grandis
Eucgr.H01651
N
0.707
Eucgr.H02009
Eucalyptus grandis
Eucgr.H02009
N
0.707