CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_32426
(
Trichoderma virens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
TRIVIDRAFT_32426
T385775_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK25595
Zinc cluster
8
47
RGCHTCKARRVRCDEGRPTCCHCRRLGYICGGYERKPPKL
Links
Other
Zinc cluster
family TFs
Other
Trichoderma virens
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_07767
Aegilops tauschii
F775_07767
N
BRADI1G78230
Brachypodium distachyon
BRADI1G78230
N
BRADI3G32890
Brachypodium distachyon
BRADI3G32890
N
MLOC_72502
Hordeum vulgare
MLOC_72502
N
ORGLA10G0130100
Oryza glaberrima
ORGLA10G0130100
N
OGLUM10G17950
Oryza glumaepatula
OGLUM10G17950
N
OMERI10G14420
Oryza meridionalis
OMERI10G14420
N
ONIVA10G20420
Oryza nivara
ONIVA10G20420
N
OPUNC10G16180
Oryza punctata
OPUNC10G16180
N
ORUFI10G19060
Oryza rufipogon
ORUFI10G19060
N
OS10G0551200
Oryza sativa
OS10G0551200
N
Pavir.Ia02417
Panicum virgatum
Pavir.Ia02417
N
Si039098m.g
Setaria italica
Si039098m.g
N
Sb01g029650
Sorghum bicolor
Sb01g029650
N
Sb01g050333
Sorghum bicolor
Sb01g050333
N
GRMZM2G079470
Zea mays
GRMZM2G079470
N