VDAG_07912 (Verticillium dahliae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDAG_07912 T387392_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_00568
M01347_2.00 		Aspergillus nidulans
NRDWBSCCGV
BCGGSVWHYN		 PBM
Lambert et al.(2019)
pEX0204 		0.541 0.590
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY16748 Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Verticillium dahliae TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_029500 Albugo laibachii ALNC14_029500 N 0.000
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I 0.000
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I 0.000
estExt_Genewise1Plus.C_2050016 Phytophthora capsici estExt_Genewise1Plus.C_2050016 I 0.000
estExt_Genewise1Plus.C_180162 Phytophthora capsici estExt_Genewise1Plus.C_180162 I 0.000
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.000
PITG_14400 Phytophthora infestans PITG_14400 I 0.000
fgenesh_scip_prom.46568.9768 Phytophthora kernoviae fgenesh_scip_prom.46568.9768 N 0.000
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.000
F443_20671 Phytophthora parasitica F443_20671 I 0.000
F443_20703 Phytophthora parasitica F443_20703 I 0.000
Phyra80922 Phytophthora ramorum Phyra80922 N 0.000
Phyra80925 Phytophthora ramorum Phyra80925 N 0.000
Phyra80938 Phytophthora ramorum Phyra80938 D 0.000
Physo132946 Phytophthora sojae Physo132946 I 0.000
Physo132965 Phytophthora sojae Physo132965 N 0.000
Physo132945 Phytophthora sojae Physo132945 I 0.000
Physo132943 Phytophthora sojae Physo132943 I 0.000
Physo132941 Phytophthora sojae Physo132941 I 0.000
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I 0.000
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I 0.000
maker-pir_contig_516-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.8 N 0.000
maker-pir_contig_435-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.6 I 0.000
maker-piw_contig_50-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_50-fgenesh-gene-0.1 I 0.000
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I 0.000
PYU1_G002831 Pythium ultimum PYU1_G002831 N 0.000
PYU1_G002833 Pythium ultimum PYU1_G002833 I 0.000
PYU1_G002835 Pythium ultimum PYU1_G002835 I 0.000
PYU1_G002849 Pythium ultimum PYU1_G002849 I 0.000
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I 0.000
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.000