CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_10_chr8_2_0000067
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.sca_10_chr8_2_0000067
T390113_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_10_chr8_2_0000067
Zinc cluster
10
48
GSCFTCRRQKQRCDRLLPQCSRCTSKAIACDYKATTTSQ
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_69.52
Carica papaya
evm.TU.supercontig_69.52
N
gene00631-v1.0-hybrid
Fragaria vesca
gene00631-v1.0-hybrid
N
MDP0000790939
Malus domestica
MDP0000790939
N
cassava41084.m1
Manihot esculenta
cassava41084.m1
N
GSMUA_Achr3G00640_001
Musa acuminata
GSMUA_Achr3G00640_001
N
29631.m001025
Ricinus communis
29631.m001025
N