PMAA_070340 (Penicillium marneffei)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 PMAA_070340 T392133_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU04663
M02604_2.00 		Neurospora crassa
NHDNNNNN
NNNNNHDN		 PBM
Weirauch et al.(2014)
pTH8890 		0.553 0.525
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_070340.t1 Zinc cluster 253 292

Links

Other Zinc cluster family TFs
Other Penicillium marneffei TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.8__404__AT5G44080.1 Arabidopsis lyrata fgenesh2_kg.8__404__AT5G44080.1 N
AT5G44080 Arabidopsis thaliana AT5G44080 N
Bostr.3148s0051 Boechera stricta Bostr.3148s0051 N
BRADI1G63840 Brachypodium distachyon BRADI1G63840 I
Bo5g004230 Brassica oleracea Bo5g004230 N
Bra015281 Brassica rapa Bra015281 N
Cagra.12696s0002 Capsella grandiflora Cagra.12696s0002 N
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N
Carubv10011573m.g Capsella rubella Carubv10011573m.g N
Carubv10027647m.g Capsella rubella Carubv10027647m.g N
Cla000389 Citrullus lanatus Cla000389 I
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I
Cucsa.184670 Cucumis sativus Cucsa.184670 I
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N
GLYMA15G05440 Glycine max GLYMA15G05440 N
GLYMA10G36820 Glycine max GLYMA10G36820 N
GLYMA08G19590 Glycine max GLYMA08G19590 N
GLYMA08G08220 Glycine max GLYMA08G08220 N
GLYMA05G25200 Glycine max GLYMA05G25200 I
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I
Lus10028575.g Linum usitatissimum Lus10028575.g N
chr4.CM0337.330.nc Lotus japonicus chr4.CM0337.330.nc I
chr6.CM0314.840.nd Lotus japonicus chr6.CM0314.840.nd N
MDP0000706379 Malus domestica MDP0000706379 I
MDP0000208334 Malus domestica MDP0000208334 N
MDP0000198495 Malus domestica MDP0000198495 I
MTR_1g098590 Medicago truncatula MTR_1g098590 N
MTR_4g094390 Medicago truncatula MTR_4g094390 I
mgf009464m Mimulus guttatus mgf009464m N
GSMUA_Achr2G20490_001 Musa acuminata GSMUA_Achr2G20490_001 I
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I
OPUNC01G36800 Oryza punctata OPUNC01G36800 I
Pavir.J06257 Panicum virgatum Pavir.J06257 I
Pavir.J36143 Panicum virgatum Pavir.J36143 I
POPTR_0002s06800 Populus trichocarpa POPTR_0002s06800 I
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I
Pm004043 Prunus mume Pm004043 I
PRUPE_ppa025544mg Prunus persica PRUPE_ppa025544mg I
29955.m001177 Ricinus communis 29955.m001177 I
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I
TCM_006432 Theobroma cacao TCM_006432 I
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I
GRMZM2G132868 Zea mays GRMZM2G132868 I