CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo7g096000
(
Brassica oleracea
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Bo7g096000
T000898_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo7g096000.1
AP2
5
56
KKFRGVRQRQWGSWVSEIRHPLFKRRVWLGTFNTAEEAAKAYDQAAVIMNGQ
Links
Other
AP2
family TFs
Other
Brassica oleracea
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10005514m.g
Eutrema salsugineum
Thhalv10005514m.g
I
0.766
Bra036543
Brassica rapa
Bra036543
I
0.764
Bo9g011380
Brassica oleracea
Bo9g011380
I
0.754
Lus10019414.g
Linum usitatissimum
Lus10019414.g
I
0.738
Gorai.011G082900
Gossypium raimondii
Gorai.011G082900
I
0.733
PGSC0003DMG400030228
Solanum tuberosum
PGSC0003DMG400030228
I
0.718
Cla021283
Citrullus lanatus
Cla021283
I
0.712
Cucsa.310360
Cucumis sativus
Cucsa.310360
I
0.712
POPTR_0006s06870
Populus trichocarpa
POPTR_0006s06870
I
0.692
Cla012435
Citrullus lanatus
Cla012435
I
0.687
Eucgr.C04221
Eucalyptus grandis
Eucgr.C04221
I
0.686
SHN3
Arabidopsis thaliana
AT5G25390
I
0.683
VIT_11s0016g05340
Vitis vinifera
VIT_11s0016g05340
I
0.683
Cla016967
Citrullus lanatus
Cla016967
I
0.683
29841.m002846
Ricinus communis
29841.m002846
I
0.683
Cucsa.132120
Cucumis sativus
Cucsa.132120
I
0.683
Cagra.1110s0005
Capsella grandiflora
Cagra.1110s0005
I
0.683
Carubv10002040m.g
Capsella rubella
Carubv10002040m.g
I
0.683
SHN2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002026
I
0.680
GLYMA13G23570
Glycine max
GLYMA13G23570
I
0.680
GLYMA17G12330
Glycine max
GLYMA17G12330
I
0.680
GRMZM2G106591
Zea mays
GRMZM2G106591
I
0.680
MTR_4g114570
Medicago truncatula
MTR_4g114570
I
0.680
POPTR_0018s13130
Populus trichocarpa
POPTR_0018s13130
I
0.680
TCM_038081
Theobroma cacao
TCM_038081
I
0.680
Ca_06673
Cicer arietinum
Ca_06673
I
0.680
28320.m001139
Ricinus communis
28320.m001139
I
0.680
cassava24223.valid.m1
Manihot esculenta
cassava24223.valid.m1
I
0.680
cassava34153.m1
Manihot esculenta
cassava34153.m1
I
0.680
Ciclev10009447m.g
Citrus clementina
Ciclev10009447m.g
I
0.680
Ciclev10009526m.g
Citrus clementina
Ciclev10009526m.g
I
0.680
Eucgr.C01178
Eucalyptus grandis
Eucgr.C01178
I
0.680
Gorai.001G042300
Gossypium raimondii
Gorai.001G042300
I
0.680
Gorai.009G017500
Gossypium raimondii
Gorai.009G017500
I
0.680
Lus10005716.g
Linum usitatissimum
Lus10005716.g
I
0.680
Lus10030097.g
Linum usitatissimum
Lus10030097.g
I
0.680
orange1.1g027896m.g
Citrus sinensis
orange1.1g027896m.g
I
0.680
orange1.1g028913m.g
Citrus sinensis
orange1.1g028913m.g
I
0.680
SapurV1A.0034s0630
Salix purpurea
SapurV1A.0034s0630
I
0.680
SapurV1A.0199s0350
Salix purpurea
SapurV1A.0199s0350
I
0.680
SapurV1A.1759s0040
Salix purpurea
SapurV1A.1759s0040
I
0.680
chr4.LjT07P17.60.nc
Lotus japonicus
chr4.LjT07P17.60.nc
I
0.680
GLYMA04G19650
Glycine max
GLYMA04G19650
I
0.678
GLYMA06G29110
Glycine max
GLYMA06G29110
I
0.678
GLYMA04G07140
Glycine max
GLYMA04G07140
I
0.677
GLYMA06G07240
Glycine max
GLYMA06G07240
I
0.677
GLYMA17G31900
Glycine max
GLYMA17G31900
I
0.677
MTR_2g103700
Medicago truncatula
MTR_2g103700
I
0.677
MTR_3g107380
Medicago truncatula
MTR_3g107380
I
0.677
POPTR_0006s26990
Populus trichocarpa
POPTR_0006s26990
I
0.677
POPTR_0018s01680
Populus trichocarpa
POPTR_0018s01680
I
0.677
Ca_02880
Cicer arietinum
Ca_02880
I
0.677
29848.m004632
Ricinus communis
29848.m004632
I
0.677
cassava10120.m1
Manihot esculenta
cassava10120.m1
I
0.677
cassava30505.valid.m1
Manihot esculenta
cassava30505.valid.m1
I
0.677
Gorai.004G292600
Gossypium raimondii
Gorai.004G292600
I
0.677
Gorai.010G114800
Gossypium raimondii
Gorai.010G114800
I
0.677
SapurV1A.0192s0020
Salix purpurea
SapurV1A.0192s0020
I
0.677
LjSGA_019003.1
Lotus japonicus
LjSGA_019003.1
I
0.677