Bo9g104780 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo9g104780 T000964_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF025
M06680_2.00 		Arabidopsis thaliana
NNNYYGCCGACANHN
NDNTGTCGGCRRNNN		 Dap-seq
OMalley et al.(2016)
Rap210_col_a 		0.737 0.979
ERF025
M06681_2.00 		Arabidopsis thaliana
NNNYNRCCGACANN
NNTGTCGGYNRNNN		 Dap-seq
OMalley et al.(2016)
Rap210_colamp_a 		0.737 0.979
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g104780.1 AP2 74 122

Links

Other AP2 family TFs
Other Brassica oleracea TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF025 Arabidopsis thaliana AT5G52020 D 0.737
Bo2g048150 Brassica oleracea Bo2g048150 I 0.737
Bra028291 Brassica rapa Bra028291 I 0.737
scaffold_801641.1 Arabidopsis lyrata scaffold_801641.1 I 0.737
Bostr.15774s0348 Boechera stricta Bostr.15774s0348 I 0.729
Carubv10027037m.g Capsella rubella Carubv10027037m.g I 0.729
Thhalv10014566m.g Eutrema salsugineum Thhalv10014566m.g I 0.729
Bo3g023490 Brassica oleracea Bo3g023490 I 0.726
Bra022573 Brassica rapa Bra022573 I 0.726
Bra029147 Brassica rapa Bra029147 I 0.726
Solyc06g035700.1 Solanum lycopersicum Solyc06g035700.1 N 0.683