CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SELMODRAFT_69412
(
Selaginella moellendorffii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
SELMODRAFT_69412
T005188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_gwp_gw1.C_550163
M01640_2.00
Physcomitrella patens
NCACCGACHN
NDGTCGGTGN
PBM
Weirauch et al.(2014)
pTH8472
0.681
0.740
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ27702
AP2
15
66
KKYRGVRMRTWGKWVSEIREPTTQARIWLGSFATPEMAARAYDAAVLYLKGS
Links
Other
AP2
family TFs
Other
Selaginella moellendorffii
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_69413
Selaginella moellendorffii
SELMODRAFT_69413
I
0.814
gw1.15.199.1
Physcomitrella patens
gw1.15.199.1
I
0.690
gw1.276.83.1
Physcomitrella patens
gw1.276.83.1
I
0.690
SELMODRAFT_73147
Selaginella moellendorffii
SELMODRAFT_73147
N
0.684
SELMODRAFT_73148
Selaginella moellendorffii
SELMODRAFT_73148
N
0.684
estExt_gwp_gw1.C_550163
Physcomitrella patens
estExt_gwp_gw1.C_550163
D
0.681