CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cla018787
(
Citrullus lanatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Cla018787
T006502_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla018787
AP2
1
51
MYKGVRRRKWGKYAAEIRDPFRGRRLWLGTYDTAEEAAFAYQRKKHEFESM
Links
Other
AP2
family TFs
Other
Citrullus lanatus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.121430
Cucumis sativus
Cucsa.121430
N
0.802
MDP0000166779
Malus domestica
MDP0000166779
N
0.733
gene25185-v1.0-hybrid
Fragaria vesca
gene25185-v1.0-hybrid
I
0.733
PRUPE_ppb025303mg
Prunus persica
PRUPE_ppb025303mg
N
0.719
Pm025195
Prunus mume
Pm025195
N
0.705
LjSGA_132504.1
Lotus japonicus
LjSGA_132504.1
I
0.681
chr6.LjT13N05.60.nc
Lotus japonicus
chr6.LjT13N05.60.nc
I
0.681
LjSGA_016572.1
Lotus japonicus
LjSGA_016572.1
I
0.681