CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.121430
(
Cucumis sativus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Cucsa.121430
T007024_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.121430.1
AP2
96
147
SMYKGVRRRKWGKYAAEIRDPFRGRRLWLGTYNTAEEAAVAYQRKKHEFESM
Links
Other
AP2
family TFs
Other
Cucumis sativus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla018787
Citrullus lanatus
Cla018787
N
0.802
MDP0000166779
Malus domestica
MDP0000166779
N
0.752
gene25185-v1.0-hybrid
Fragaria vesca
gene25185-v1.0-hybrid
I
0.725
PRUPE_ppb025303mg
Prunus persica
PRUPE_ppb025303mg
N
0.723
Pm025195
Prunus mume
Pm025195
N
0.709
LjSGA_016572.1
Lotus japonicus
LjSGA_016572.1
I
0.698
LjSGA_132504.1
Lotus japonicus
LjSGA_132504.1
I
0.698
chr6.LjT13N05.60.nc
Lotus japonicus
chr6.LjT13N05.60.nc
I
0.698
Cucsa.365320
Cucumis sativus
Cucsa.365320
I
0.695
Cla008128
Citrullus lanatus
Cla008128
I
0.695
VIT_01s0011g03470
Vitis vinifera
VIT_01s0011g03470
I
0.694
PGSC0003DMG400015880
Solanum tuberosum
PGSC0003DMG400015880
I
0.694
Solyc04g007180.1
Solanum lycopersicum
Solyc04g007180.1
I
0.694
chr2.CM0903.260.nd
Lotus japonicus
chr2.CM0903.260.nd
I
0.690
MDP0000273201
Malus domestica
MDP0000273201
N
0.689
MDP0000119204
Malus domestica
MDP0000119204
N
0.689