chr5.CM0260.670.nd (Lotus japonicus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 chr5.CM0260.670.nd T016274_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.CM0260.670.nd ARID/BRIGHT 37 122

Links

Other ARID/BRIGHT family TFs
Other Lotus japonicus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g029808m.g Citrus sinensis orange1.1g029808m.g I 0.581
SapurV1A.0338s0260 Salix purpurea SapurV1A.0338s0260 I 0.511
MLOC_42821 Hordeum vulgare MLOC_42821 I 0.509
LjSGA_063865.0.1 Lotus japonicus LjSGA_063865.0.1 N 0.488
MDP0000198823 Malus domestica MDP0000198823 I 0.468
CMM307C Cyanidioschyzon merolae CMM307C I 0.466
Cla007529 Citrullus lanatus Cla007529 I 0.448
Cla016376 Citrullus lanatus Cla016376 I 0.446
UREG_01193 Uncinocarpus reesii UREG_01193 N 0.440
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.437
HelroG64754 Helobdella robusta HelroG64754 I 0.435
ENSOANG00000010382 Ornithorhynchus anatinus ENSOANG00000010382 I 0.435
EFA85631.1 Polysphondylium pallidum EFA85631.1 I 0.430
Carubv10021996m.g Capsella rubella Carubv10021996m.g N 0.428
ARID3B Loxodonta africana ENSLAFG00000002987 I 0.427
ARID3B Echinops telfairi ENSETEG00000000100 I 0.427
ENSMEUG00000002417 Macropus eugenii ENSMEUG00000002417 I 0.427
ENSSHAG00000017446 Sarcophilus harrisii ENSSHAG00000017446 I 0.427
ENSDNOG00000042496 Dasypus novemcinctus ENSDNOG00000042496 I 0.427
SCUD_0001335501 Schistosoma curassoni SCUD_0001335501 I 0.425
T265_04110 Opisthorchis viverrini T265_04110 I 0.425
D915_07576 Fasciola hepatica D915_07576 I 0.425
A_05913 Schistosoma haematobium A_05913 I 0.425
Smp_135110 Schistosoma mansoni Smp_135110 I 0.425
Sjc_0028570 Schistosoma japonicum Sjc_0028570 I 0.425
gw.107.92.1 Branchiostoma floridae gw.107.92.1 I 0.425
csin102087 Clonorchis sinensis csin102087 I 0.425