Thhalv10029161m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10029161m.g T024299_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10029161m B3 121 223

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thhalv10029379m.g Eutrema salsugineum Thhalv10029379m.g I 0.969
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I 0.765
30068.m002516 Ricinus communis 30068.m002516 I 0.765
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I 0.765
GLYMA01G25270 Glycine max GLYMA01G25270 I 0.755
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.755
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.755
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I 0.755
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.755
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.755
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.755
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.755
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.755
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.755
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.755
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.755
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.755
TCM_016500 Theobroma cacao TCM_016500 I 0.745
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I 0.745
Gorai.003G078000 Gossypium raimondii Gorai.003G078000 I 0.745
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.745
PK02218.1 Cannabis sativa PK02218.1 I 0.745
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.745
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.735
Ca_21948 Cicer arietinum Ca_21948 I 0.735
Cla013021 Citrullus lanatus Cla013021 I 0.735
gene25123-v1.0-hybrid Fragaria vesca gene25123-v1.0-hybrid I 0.735
Lus10023058.g Linum usitatissimum Lus10023058.g I 0.735
Lus10032413.g Linum usitatissimum Lus10032413.g I 0.735
MDP0000139073 Malus domestica MDP0000139073 I 0.735
SapurV1A.1529s0070 Salix purpurea SapurV1A.1529s0070 I 0.735
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.725
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.724
GLYMA07G16170 Glycine max GLYMA07G16170 I 0.724
GLYMA18G40180 Glycine max GLYMA18G40180 I 0.724
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.724
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.724
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.724
POPTR_0014s09560 Populus trichocarpa POPTR_0014s09560 I 0.724
TCM_005126 Theobroma cacao TCM_005126 I 0.724
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I 0.724
mgf005549m Mimulus guttatus mgf005549m I 0.724
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I 0.724
Eucgr.E00888 Eucalyptus grandis Eucgr.E00888 I 0.724
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.724
ARF13 Arabidopsis lyrata Al_scaffold_0001_3500 N 0.714
ARF11 Arabidopsis thaliana AT2G46530 I 0.714
ARF9 Arabidopsis thaliana AT4G23980 I 0.714
Bo1g037360 Brassica oleracea Bo1g037360 I 0.714
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.714
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.714
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.714
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.714
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.714
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.714
LPERR12G09930 Leersia perrieri LPERR12G09930 I 0.714
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.714
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.714
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.714
PRUPE_ppa002617mg Prunus persica PRUPE_ppa002617mg I 0.714
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.714
Sb08g014320 Sorghum bicolor Sb08g014320 I 0.714
Si000340m.g Setaria italica Si000340m.g I 0.714
Si021216m.g Setaria italica Si021216m.g I 0.714
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.714
Solyc08g008380.2 Solanum lycopersicum Solyc08g008380.2 I 0.714
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.714
Ca_23296 Cicer arietinum Ca_23296 I 0.714
Cla019614 Citrullus lanatus Cla019614 I 0.714
Pm024149 Prunus mume Pm024149 I 0.714
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.714
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.714
mgf006511m Mimulus guttatus mgf006511m I 0.714
mgf015308m Mimulus guttatus mgf015308m I 0.714
Bostr.13158s0186 Boechera stricta Bostr.13158s0186 I 0.714
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I 0.714
Bostr.7867s0204 Boechera stricta Bostr.7867s0204 I 0.714
Eucgr.D01764 Eucalyptus grandis Eucgr.D01764 I 0.714
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I 0.714
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.714
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.714
Gorai.001G153900 Gossypium raimondii Gorai.001G153900 I 0.714
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.714
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.714
MDP0000258032 Malus domestica MDP0000258032 I 0.714
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.714
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.714
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.714
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.714
SapurV1A.0013s0230 Salix purpurea SapurV1A.0013s0230 I 0.714
Thhalv10024554m.g Eutrema salsugineum Thhalv10024554m.g I 0.714
PK16974.1 Cannabis sativa PK16974.1 I 0.714
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.714
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I 0.714
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I 0.711
MTR_7g062540 Medicago truncatula MTR_7g062540 I 0.711
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.711
ARF9 Arabidopsis lyrata Al_scaffold_0007_1752 I 0.704
ARF2 Arabidopsis thaliana AT5G62000 D 0.704
ARF23 Oryza indica BGIOSGA033901 I 0.704
Bo2g161810 Brassica oleracea Bo2g161810 I 0.704
Bo3g039330 Brassica oleracea Bo3g039330 I 0.704
Bo3g108130 Brassica oleracea Bo3g108130 I 0.704
Bo7g109250 Brassica oleracea Bo7g109250 I 0.704
Bo9g014770 Brassica oleracea Bo9g014770 I 0.704
Bra010048 Brassica rapa Bra010048 I 0.704
Bra013748 Brassica rapa Bra013748 I 0.704
Bra019255 Brassica rapa Bra019255 I 0.704
Bra035910 Brassica rapa Bra035910 I 0.704
F775_31280 Aegilops tauschii F775_31280 I 0.704
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.704
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.704
GSMUA_Achr7G24330_001 Musa acuminata GSMUA_Achr7G24330_001 I 0.704
GSMUA_AchrUn_randomG11300_001 Musa acuminata GSMUA_AchrUn_randomG11300_001 I 0.704
GSMUA_AchrUn_randomG14770_001 Musa acuminata GSMUA_AchrUn_randomG14770_001 I 0.704
LPERR11G11950 Leersia perrieri LPERR11G11950 I 0.704
OB11G21910 Oryza brachyantha OB11G21910 I 0.704
OB12G20020 Oryza brachyantha OB12G20020 I 0.704
OBART11G15270 Oryza barthii OBART11G15270 I 0.704
OGLUM01G46840 Oryza glumaepatula OGLUM01G46840 I 0.704
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I 0.704
OLONG_022378 Oryza longistaminata OLONG_022378 I 0.704
OMERI11G12590 Oryza meridionalis OMERI11G12590 I 0.704
ONIVA12G10760 Oryza nivara ONIVA12G10760 I 0.704
OPUNC01G41560 Oryza punctata OPUNC01G41560 I 0.704
OPUNC11G12650 Oryza punctata OPUNC11G12650 I 0.704
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I 0.704
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I 0.704
OS11G0523800 Oryza sativa OS11G0523800 I 0.704
PGSC0003DMG400012261 Solanum tuberosum PGSC0003DMG400012261 I 0.704
PGSC0003DMG400014179 Solanum tuberosum PGSC0003DMG400014179 I 0.704
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.704
POPTR_0002s17350 Populus trichocarpa POPTR_0002s17350 I 0.704
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.704
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I 0.704
ARF11 Arabidopsis lyrata scaffold_403621.1 I 0.704
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.704
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.704
TCM_014743 Theobroma cacao TCM_014743 I 0.704
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.704
Ca_05681 Cicer arietinum Ca_05681 I 0.704
Pm018352 Prunus mume Pm018352 I 0.704
Pm024588 Prunus mume Pm024588 I 0.704
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.704
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.704
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.704
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.704
mgf020855m Mimulus guttatus mgf020855m I 0.704
Bostr.15774s0314 Boechera stricta Bostr.15774s0314 N 0.704
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.704
Cagra.0483s0062 Capsella grandiflora Cagra.0483s0062 I 0.704
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.704
Carubv10018954m.g Capsella rubella Carubv10018954m.g I 0.704
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.704
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.704
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I 0.704
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.704
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.704
MDP0000194603 Malus domestica MDP0000194603 I 0.704
MDP0000310875 Malus domestica MDP0000310875 I 0.704
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.704
SapurV1A.0517s0240 Salix purpurea SapurV1A.0517s0240 I 0.704
SapurV1A.0672s0210 Salix purpurea SapurV1A.0672s0210 I 0.704
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.704
Thhalv10001365m.g Eutrema salsugineum Thhalv10001365m.g I 0.704
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.704
PK07332.1 Cannabis sativa PK07332.1 I 0.704
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.704