CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-par_contig_782-fgenesh-gene-0.0
(
Pythium arrhenomanes
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
maker-par_contig_782-fgenesh-gene-0.0
T026888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPR00000018609
BED ZF
65
105
SAVWAYFDKDAMGNSVCKFCDRVIKGHHSSNLLSHLRTAGR
Links
Other
BED ZF
family TFs
Other
Pythium arrhenomanes
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pve_contig_450-fgenesh-gene-0.9
Pythium vexans
maker-pve_contig_450-fgenesh-gene-0.9
N
0.927
PYU1_G007526
Pythium ultimum
PYU1_G007526
N
0.927
Phyra75461
Phytophthora ramorum
Phyra75461
N
0.878
Physo142161
Phytophthora sojae
Physo142161
N
0.878
maker-pag1_scaffold_281-snap-gene-0.12
Pythium aphanidermatum
maker-pag1_scaffold_281-snap-gene-0.12
N
0.878
fgenesh_scip_prom.28083.1893
Phytophthora lateralis
fgenesh_scip_prom.28083.1893
N
0.878
ALNC14_092890
Albugo laibachii
ALNC14_092890
N
0.878
fgenesh_masked-pir_contig_606-abinit-gene-0.23
Pythium irregulare
fgenesh_masked-pir_contig_606-abinit-gene-0.23
N
0.829
fgenesh_scip_prom.46568.3443
Phytophthora kernoviae
fgenesh_scip_prom.46568.3443
N
0.829
maker-piw_contig_1546-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_1546-fgenesh-gene-0.1
N
0.829