CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra75671
(
Phytophthora ramorum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Phyra75671
T027279_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra75671
BED ZF
54
91
SLSDTSNRHRCRLCSNCYTQAAGTGYTNLLTHLRIKHP
Phyra75671
BED ZF
146
191
GPVYEHFEDIPSSPGNKQKKMRCVYCHEDTLQLSRRLKLHLVAKCP
Links
Other
BED ZF
family TFs
Other
Phytophthora ramorum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.10469
Phytophthora lateralis
fgenesh_scip_prom.28083.10469
N
0.911
F443_10632
Phytophthora parasitica
F443_10632
N
0.808
estExt_Genewise1Plus.C_00026
Phytophthora capsici
estExt_Genewise1Plus.C_00026
N
0.772
Physo138132
Phytophthora sojae
Physo138132
N
0.769
PITG_14943
Phytophthora infestans
PITG_14943
N
0.718