CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Physo138132
(
Phytophthora sojae
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Physo138132
T027310_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Physo138132
BED ZF
42
81
RAPLGGGANRHLCRLCQNVYTQAASTGYTNLLTHLRIKHP
Physo138132
BED ZF
137
182
GPVYEHFEDVPASPGTKHKKMRCLYCHEDSPQISGRLKLHLSAKCP
Links
Other
BED ZF
family TFs
Other
Phytophthora sojae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_10632
Phytophthora parasitica
F443_10632
N
0.795
Phyra75671
Phytophthora ramorum
Phyra75671
N
0.769
estExt_Genewise1Plus.C_00026
Phytophthora capsici
estExt_Genewise1Plus.C_00026
N
0.759
fgenesh_scip_prom.28083.10469
Phytophthora lateralis
fgenesh_scip_prom.28083.10469
N
0.747
PITG_14943
Phytophthora infestans
PITG_14943
N
0.731