CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si000460m.g
(
Setaria italica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Si000460m.g
T027646_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000460m
BED ZF
57
115
SAVWQDFTKERRADGNCVAVCNHCKKQLTATSRSGTTHLRNHLAICMTTSTRRAGKRRK
Links
Other
BED ZF
family TFs
Other
Setaria italica
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J32299
Panicum virgatum
Pavir.J32299
N
0.976
Traes_3AL_FC7246FF6
Triticum aestivum
Traes_3AL_FC7246FF6
N
0.952
MLOC_73985
Hordeum vulgare
MLOC_73985
N
0.929
OB01G36830
Oryza brachyantha
OB01G36830
N
0.929
ORGLA01G0228500
Oryza glaberrima
ORGLA01G0228500
N
0.929
OS01G0698300
Oryza sativa
OS01G0698300
N
0.929
TRIUR3_08163
Triticum urartu
TRIUR3_08163
N
0.929
Sb03g032090
Sorghum bicolor
Sb03g032090
N
0.905
BRADI2G47457
Brachypodium distachyon
BRADI2G47457
N
0.881
Pavir.Ea02527
Panicum virgatum
Pavir.Ea02527
N
0.857
GSMUA_Achr3G28870_001
Musa acuminata
GSMUA_Achr3G28870_001
N
0.833
GSMUA_Achr9G21970_001
Musa acuminata
GSMUA_Achr9G21970_001
N
0.810
PDK_20s1653701g002
Phoenix dactylifera
PDK_20s1653701g002
N
0.810