Pavir.J32299 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J32299 T028635_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J32299.1.p BED ZF 57 115
Pavir.J32299.2.p BED ZF 57 115
Pavir.J32299.3.p BED ZF 39 97

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si000460m.g Setaria italica Si000460m.g N 0.976
Traes_3AL_FC7246FF6 Triticum aestivum Traes_3AL_FC7246FF6 N 0.929
MLOC_73985 Hordeum vulgare MLOC_73985 N 0.905
OB01G36830 Oryza brachyantha OB01G36830 N 0.905
ORGLA01G0228500 Oryza glaberrima ORGLA01G0228500 N 0.905
OS01G0698300 Oryza sativa OS01G0698300 N 0.905
TRIUR3_08163 Triticum urartu TRIUR3_08163 N 0.905
Sb03g032090 Sorghum bicolor Sb03g032090 N 0.881
Pavir.Ea02527 Panicum virgatum Pavir.Ea02527 N 0.881
BRADI2G47457 Brachypodium distachyon BRADI2G47457 N 0.857
GSMUA_Achr3G28870_001 Musa acuminata GSMUA_Achr3G28870_001 N 0.810
GSMUA_Achr9G21970_001 Musa acuminata GSMUA_Achr9G21970_001 N 0.786
PDK_20s1653701g002 Phoenix dactylifera PDK_20s1653701g002 N 0.786