CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10008848
(
Chelonia mydas
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Cmyd_10008848
T027980_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10008848
BED ZF
42
78
LMDFNPARHGMICMVCGSALATLKLSTIKRHIRQKHP
Cmyd_10008848
BED ZF
282
329
RHFQEHWRLEYLMDYHGERHGLVCMVCGGALATLKMSTIKRHIRQRHP
Cmyd_10008848
BED ZF
442
481
VEYLMDYDGRRHGLVCMVCGGALATLKVSTIKRHILQVHP
Links
Other
BED ZF
family TFs
Other
Chelonia mydas
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPPYG00000003127
Pongo abelii
ENSPPYG00000003127
N
0.851
C11orf95
Loxodonta africana
ENSLAFG00000020497
N
0.828
C11orf95
Canis familiaris
ENSCAFG00000015061
N
0.819
C11orf95
Dasypus novemcinctus
ENSDNOG00000039852
N
0.819
2700081O15Rik
Mus musculus
ENSMUSG00000053080
N
0.819
ENSSTOG00000027225
Ictidomys tridecemlineatus
ENSSTOG00000027225
N
0.819
Pvit_07307
Pogona vitticeps
Pvit_07307
N
0.816
ENSCSAG00000006866
Chlorocebus sabaeus
ENSCSAG00000006866
N
0.802
C11orf95
Homo sapiens
ENSG00000188070
N
0.802
C11orf95
Gorilla gorilla
ENSGGOG00000006043
N
0.802
ENSNLEG00000004648
Nomascus leucogenys
ENSNLEG00000004648
N
0.802
ENSPANG00000024910
Papio anubis
ENSPANG00000024910
N
0.802
Ogr12226
Ophisaurus gracilis
Ogr12226
N
0.793
C11orf95
Otolemur garnettii
ENSOGAG00000030093
N
0.790
ENSPSIG00000005255
Pelodiscus sinensis
ENSPSIG00000005255
N
0.724