CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr12226
(
Ophisaurus gracilis
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Ogr12226
T028018_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr12226
BED ZF
95
134
AEYLMDFNAARHGMICMVCGSSLATLKLSTIKRHIRQKHP
Ogr12226
BED ZF
349
390
WRVEYLMDYNGLRHGLVCMVCGSALATLKMSTIKRHIQQKHP
Ogr12226
BED ZF
481
520
VEFLMDYDEQRHGLICMVCGGTLATLKVSTIKRHILQMHR
Links
Other
BED ZF
family TFs
Other
Ophisaurus gracilis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pvit_07307
Pogona vitticeps
Pvit_07307
N
0.982
C11orf95
Loxodonta africana
ENSLAFG00000020497
N
0.833
ENSSTOG00000027225
Ictidomys tridecemlineatus
ENSSTOG00000027225
N
0.832
2700081O15Rik
Mus musculus
ENSMUSG00000053080
N
0.831
C11orf95
Otolemur garnettii
ENSOGAG00000030093
N
0.824
C11orf95
Dasypus novemcinctus
ENSDNOG00000039852
N
0.818
ENSCSAG00000006866
Chlorocebus sabaeus
ENSCSAG00000006866
N
0.815
C11orf95
Homo sapiens
ENSG00000188070
N
0.815
C11orf95
Gorilla gorilla
ENSGGOG00000006043
N
0.815
ENSNLEG00000004648
Nomascus leucogenys
ENSNLEG00000004648
N
0.815
ENSPANG00000024910
Papio anubis
ENSPANG00000024910
N
0.815
Cmyd_10008848
Chelonia mydas
Cmyd_10008848
N
0.793
ENSPPYG00000003127
Pongo abelii
ENSPPYG00000003127
N
0.789
C11orf95
Canis familiaris
ENSCAFG00000015061
N
0.735
ENSAMXG00000006429
Astyanax mexicanus
ENSAMXG00000006429
N
0.712
ENSXMAG00000007936
Xiphophorus maculatus
ENSXMAG00000007936
N
0.711