Gorai.007G008000 (Gossypium raimondii)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Gorai.007G008000 T028346_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.007G008000.1 BED ZF 57 99
Gorai.007G008000.2 BED ZF 57 99

Links

Other BED ZF family TFs
Other Gossypium raimondii TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_012243 Theobroma cacao TCM_012243 N 1.000
cassava37498.valid.m1 Manihot esculenta cassava37498.valid.m1 N 0.977
cassava37499.valid.m1 Manihot esculenta cassava37499.valid.m1 N 0.977
cassava37500.valid.m1 Manihot esculenta cassava37500.valid.m1 N 0.977
POPTR_0012s05580 Populus trichocarpa POPTR_0012s05580 N 0.953
Solyc03g119830.2 Solanum lycopersicum Solyc03g119830.2 N 0.953
VIT_17s0000g04250 Vitis vinifera VIT_17s0000g04250 N 0.953
SapurV1A.0851s0040 Salix purpurea SapurV1A.0851s0040 N 0.953
SapurV1A.3382s0020 Salix purpurea SapurV1A.3382s0020 N 0.953
PK14806.1 Cannabis sativa PK14806.1 N 0.953
AT1G18560 Arabidopsis thaliana AT1G18560 N 0.930
GLYMA05G07875 Glycine max GLYMA05G07875 N 0.930
GLYMA17G13141 Glycine max GLYMA17G13141 N 0.930
PGSC0003DMG400005619 Solanum tuberosum PGSC0003DMG400005619 N 0.930
PRUPE_ppa002398mg Prunus persica PRUPE_ppa002398mg N 0.930
Pm030213 Prunus mume Pm030213 N 0.930
Cucsa.090680 Cucumis sativus Cucsa.090680 N 0.930
Bostr.7128s0463 Boechera stricta Bostr.7128s0463 N 0.930
Cagra.0909s0036 Capsella grandiflora Cagra.0909s0036 N 0.930
Carubv10008481m.g Capsella rubella Carubv10008481m.g N 0.930
Ciclev10019100m.g Citrus clementina Ciclev10019100m.g N 0.930
MDP0000637083 Malus domestica MDP0000637083 N 0.930
orange1.1g008805m.g Citrus sinensis orange1.1g008805m.g N 0.930
Thhalv10006990m.g Eutrema salsugineum Thhalv10006990m.g N 0.930
LjSGA_062426.1 Lotus japonicus LjSGA_062426.1 N 0.930
gene26197-v1.0-hybrid Fragaria vesca gene26197-v1.0-hybrid N 0.907
MDP0000155004 Malus domestica MDP0000155004 N 0.907
Aquca_002_01079 Aquilegia coerulea Aquca_002_01079 N 0.884
Eucgr.B00689 Eucalyptus grandis Eucgr.B00689 N 0.884
PDK_20s1489551g002 Phoenix dactylifera PDK_20s1489551g002 N 0.884
AMTR_s00024p00250640 Amborella trichopoda AMTR_s00024p00250640 N 0.860
Bo5g083750 Brassica oleracea Bo5g083750 N 0.837
Bo8g104310 Brassica oleracea Bo8g104310 N 0.837
GSMUA_Achr6G09360_001 Musa acuminata GSMUA_Achr6G09360_001 N 0.744