CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Ia00801
(
Panicum virgatum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Pavir.Ia00801
T028515_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia00801.1.p
BED ZF
8
43
VDGIEKAICKYCRTQLSLVAGKGTSHLNRHIGYHCP
Links
Other
BED ZF
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Gb00061
Panicum virgatum
Pavir.Gb00061
N
0.912
Pavir.J14988
Panicum virgatum
Pavir.J14988
N
0.882
Pavir.J23025
Panicum virgatum
Pavir.J23025
N
0.727
Pavir.J30669
Panicum virgatum
Pavir.J30669
N
0.727
Pavir.Eb03203
Panicum virgatum
Pavir.Eb03203
N
0.706
Pavir.J03423
Panicum virgatum
Pavir.J03423
N
0.706
Pavir.J21810
Panicum virgatum
Pavir.J21810
N
0.706