CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10015876m.g
(
Eutrema salsugineum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Thhalv10015876m.g
T028719_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10015876m
BED ZF
2
30
NPDKVKCILCGKEFSGGVHRLKLHIAHKK
Links
Other
BED ZF
family TFs
Other
Eutrema salsugineum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10002303m.g
Eutrema salsugineum
Thhalv10002303m.g
N
0.778
Thhalv10023973m.g
Eutrema salsugineum
Thhalv10023973m.g
N
0.778
Bo04593s010
Brassica oleracea
Bo04593s010
N
0.704
Bo2g082100
Brassica oleracea
Bo2g082100
N
0.704
Bo9g165450
Brassica oleracea
Bo9g165450
N
0.704
MDP0000679950
Malus domestica
MDP0000679950
N
0.704
Thhalv10026863m.g
Eutrema salsugineum
Thhalv10026863m.g
N
0.704