CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PDK_20s1631911g001
(
Phoenix dactylifera
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
PDK_20s1631911g001
T029013_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1631911g001
BED ZF
6
48
DACWEHCVLVDATRQKVRCNYCHREFSGGVYRMKFHLAQIKNK
Links
Other
BED ZF
family TFs
Other
Phoenix dactylifera
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr8G28860_001
Musa acuminata
GSMUA_Achr8G28860_001
N
1.000
TCM_016057
Theobroma cacao
TCM_016057
N
0.975
AMTR_s00061p00028660
Amborella trichopoda
AMTR_s00061p00028660
N
0.974
PGSC0003DMG401012482
Solanum tuberosum
PGSC0003DMG401012482
N
0.950
evm.TU.supercontig_29.102
Carica papaya
evm.TU.supercontig_29.102
N
0.950
MDP0000230416
Malus domestica
MDP0000230416
N
0.949
Solyc08g007470.1
Solanum lycopersicum
Solyc08g007470.1
N
0.925
gene32271-v1.0-hybrid
Fragaria vesca
gene32271-v1.0-hybrid
N
0.925
GLYMA01G42065
Glycine max
GLYMA01G42065
N
0.921
Pm023575
Prunus mume
Pm023575
N
0.900
30190.m011006
Ricinus communis
30190.m011006
N
0.878
PK14046.1
Cannabis sativa
PK14046.1
N
0.872