PGSC0003DMG400014432 (Solanum tuberosum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 PGSC0003DMG400014432 T043459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH34
M01704_2.00 		Arabidopsis thaliana
VCACGYGH
DCRCGTGB		 PBM
Weirauch et al.(2014)
pTH7212 		0.876 0.750
BHLH34
M06734_2.00 		Arabidopsis thaliana
NNNHNNDNNNNVCACGTGHCN
NGDCACGTGBNNNNHNNDNNN		 Dap-seq
OMalley et al.(2016)
bHLH34_colamp_a 		0.876 0.750
BHLH34
M06735_2.00 		Arabidopsis thaliana
RWRNNNNNCACGTGBNNNNNNNN
NNNNNNNNVCACGTGNNNNNYWY		 Dap-seq
OMalley et al.(2016)
bHLH34_col 		0.876 0.750
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400037405 bHLH 73 124

Links

Other bHLH family TFs
Other Solanum tuberosum TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BHLH34 Arabidopsis thaliana AT3G23210 D 0.876
bHLH34 Arabidopsis lyrata fgenesh2_kg.3__2536__AT3G23210.1 I 0.876
VIT_14s0081g00720 Vitis vinifera VIT_14s0081g00720 I 0.872
Solyc10g006510.2 Solanum lycopersicum Solyc10g006510.2 I 0.867
PGSC0003DMG400019263 Solanum tuberosum PGSC0003DMG400019263 I 0.864
Gorai.011G172500 Gossypium raimondii Gorai.011G172500 I 0.840