CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RTG1
(
Saccharomyces cerevisiae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
YOL067C
T046368_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RTG1
M08486_2.00
Saccharomyces cerevisiae
HNTBACTCMYN
NRKGAGTVAND
Misc
DeBoer et al.(2011)
YOL067C_1493
(Direct)
(Direct)
RTG1
M08487_2.00
Saccharomyces cerevisiae
NGTGACCN
NGGTCACN
Misc
DeBoer et al.(2011)
YOL067C_1494
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
YOL067C
bHLH
12
97
SCGANFKNDRKRRDKINDRIQELLSIIPKDFFRDYYGNSGSNDTLSESTPGALGLSSKAKGTGTKDGKPNKGQILTQAVEYISHLQ
Links
Other
bHLH
family TFs
Other
Saccharomyces cerevisiae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
19547_YOL067C
Saccharomyces mikatae
19547_YOL067C
I
0.914
20063_YOL067C
Saccharomyces paradoxus
20063_YOL067C
I
0.914
SU7_3138
Saccharomyces arboricola
SU7_3138
I
0.884
22478_YOL067C
Saccharomyces bayanus
22478_YOL067C
I
0.884